| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g02344 | 12:4,822,190-4,824,145 | + | C1H12g14579 | CX12g015919 | LOC_Os12g10340 | Os12g0204800 | - | Detail |
| C2H12g25946 | 12:4,832,740-4,833,163 | - | C1H12g02564 | CX12g015129 | LOC_Os12g10360 | Os12g0204600 | - | Detail |
| C2H12g14824 | 12:4,834,838-4,835,416 | + | C1H12g25059 | - | LOC_Os12g10320 | Os12g0204500 | - | Detail |
| C2H12g20127 | 12:4,849,547-4,851,448 | - | C1H12g01099 | CX12g016073 | LOC_Os12g10390 | Os12g0204600 | - | Detail |
| C2H12g17911 | 12:4,860,026-4,866,106 | - | C1H12g29266 | CX12g018520 | LOC_Os12g10410 | Os12g0205500 | - | Detail |
| C2H12g21157 | 12:4,905,078-4,907,428 | - | C1H12g30583 | CX12g017375 | LOC_Os12g10520 | Os12g0206800 | - | Detail |
| C2H12g03231 | 12:4,920,624-4,924,375 | + | C1H12g20628 | CX12g017375 | LOC_Os12g10540 | Os12g0207000 | OsMADS13 | Detail |
| C2H12g03303 | 12:4,925,533-4,928,218 | + | C1H12g06590 | CX12g017375 | LOC_Os12g10550 | Os12g0207200 | - | Detail |
| C2H12g11349 | 12:4,931,268-4,935,170 | + | C1H12g28035 | CX12g016297 | LOC_Os12g10560 | Os12g0207300 | - | Detail |
| C2H12g00454 | 12:4,955,061-4,959,527 | - | C1H12g14134 | CX12g016832 | LOC_Os12g10640 | Os12g0209000 | - | Detail |
| C2H12g03167 | 12:4,964,854-4,966,861 | + | C1H12g20126 | CX12g017848 | LOC_Os12g10650 | Os12g0209100 | - | Detail |
| C2H12g07296 | 12:4,970,609-4,973,000 | + | C1H12g08359 | CX12g018182 | LOC_Os12g10660 | Os12g0209200 | - | Detail |
| C2H12g07494 | 12:4,973,589-4,983,978 | - | C1H12g26070 | CX12g016116 | LOC_Os12g10670 | Os12g0209300 | - | Detail |
| C2H12g24281 | 12:5,005,008-5,012,845 | + | C1H12g25584 | CX12g016275 | LOC_Os12g10700 | Os12g0209700 | - | Detail |
| C2H12g16222 | 12:5,013,715-5,025,653 | - | C1H12g04109 | CX12g015857 | LOC_Os12g10710 | Os12g0209800 | - | Detail |
| C2H12g11181 | 12:5,031,384-5,035,800 | + | C1H12g13966 | CX12g015356 | LOC_Os12g10720 | Os12g0210200 | OsGSTZ1 | Detail |
| C2H12g23052 | 12:5,039,424-5,042,681 | + | C1H12g14959 | CX12g017934 | LOC_Os12g10730 | Os12g0210300 | OsGSTZ2 | Detail |
| C2H12g22614 | 12:5,044,822-5,051,683 | + | C1H12g28216 | CX12g018439 | LOC_Os12g10740 | Os12g0210400 | RIR1 | Detail |
| C2H12g18765 | 12:5,054,323-5,055,616 | - | C1H12g23522 | CX12g018505 | LOC_Os12g10750 | Os12g0210500 | - | Detail |
| C2H12g01604 | 12:5,077,502-5,083,713 | + | C1H12g11850 | CX12g015352 | LOC_Os12g10784 | Os12g0210800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025944 | 3:30,216,464-30,216,910 | - | C1H3g29791 | - | - | Os03g0748750 | - | Detail |
| CX3g028895 | 3:30,242,405-30,242,671 | + | C1H3g08111 | C2H3g28162 | LOC_Os03g56784 | Os03g0780350 | - | Detail |
| CX3g025581 | 3:30,244,035-30,246,097 | - | C1H3g23563 | C2H3g20617 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| CX3g026219 | 3:30,248,863-30,253,402 | + | C1H3g23600 | C2H3g18001 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| CX3g030860 | 3:30,254,609-30,257,265 | + | C1H3g17595 | C2H3g14864 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| CX3g026170 | 3:30,259,644-30,261,029 | + | C1H3g26439 | C2H3g16433 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| CX3g028624 | 3:30,262,741-30,265,043 | - | C1H3g14922 | C2H3g03306 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| CX3g030035 | 3:30,266,478-30,269,758 | - | C1H3g04528 | C2H3g10423 | LOC_Os03g56840 | Os03g0781000 | - | Detail |
| CX3g028006 | 3:30,270,442-30,273,006 | + | C1H3g00697 | C2H3g00662 | LOC_Os03g56850 | Os03g0781100 | - | Detail |
| CX3g031346 | 3:30,275,155-30,275,834 | - | C1H3g00675 | C2H3g16006 | LOC_Os03g56860 | Os03g0781300 | - | Detail |
| CX3g029784 | 3:30,276,729-30,278,572 | - | C1H3g13066 | C2H3g09130 | LOC_Os03g56869 | Os03g0781400 | - | Detail |
| CX3g025012 | 3:30,281,143-30,281,649 | - | - | C2H3g00286 | LOC_Os03g56890 | Os03g0781600 | - | Detail |
| CX3g028940 | 3:30,283,652-30,284,973 | - | C1H3g04826 | C2H3g00286 | LOC_Os03g56900 | Os03g0781700 | - | Detail |
| CX3g026580 | 3:30,294,457-30,294,945 | + | - | - | LOC_Os03g56930 | Os03g0782200 | - | Detail |
| CX3g031282 | 3:30,300,392-30,300,751 | - | - | - | - | - | - | Detail |
| CX3g026212 | 3:30,305,625-30,307,365 | + | C1H3g18147 | C2H3g19846 | LOC_Os03g56950 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g026808 | 3:30,315,505-30,317,441 | - | C1H3g10536 | C2H3g26278 | LOC_Os03g56960 | Os03g0782900 | - | Detail |
| CX3g030659 | 3:30,317,806-30,322,307 | + | C1H3g29435 | C2H3g17813 | LOC_Os03g56970 | Os03g0783000 | - | Detail |
| CX3g025708 | 3:30,327,793-30,328,041 | + | - | - | - | - | - | Detail |
| CX3g025367 | 3:30,339,798-30,340,244 | - | - | - | - | - | - | Detail |