| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g02861 | 6:9,321,596-9,324,952 | - | C2H6g26580 | CX6g043920 | LOC_Os06g19640 | Os06g0300600 | - | Detail |
| C1H6g14940 | 6:9,332,062-9,332,996 | + | - | - | - | - | - | Detail |
| C1H6g26999 | 6:9,333,103-9,338,082 | + | C2H6g03142 | CX6g045766 | LOC_Os06g19650 | Os06g0300700 | - | Detail |
| C1H6g02079 | 6:9,343,432-9,352,103 | + | C2H6g00260 | CX6g043735 | LOC_Os06g19660 | Os06g0300800 | - | Detail |
| C1H6g04702 | 6:9,372,351-9,377,827 | - | C2H6g11264 | CX6g043851 | LOC_Os06g19680 | Os06g0301000 | MAL, OsMAL | Detail |
| C1H6g17786 | 6:9,380,262-9,385,485 | - | C2H6g15269 | CX6g044892 | LOC_Os06g19690 | Os06g0301100 | - | Detail |
| C1H6g16427 | 6:9,400,161-9,417,405 | + | C2H6g20000 | CX6g043357 | LOC_Os06g19730 | Os06g0301300 | - | Detail |
| C1H6g18993 | 6:9,420,919-9,421,499 | - | C2H1g25920 | CX1g005321 | LOC_Os09g32790 | - | - | Detail |
| C1H6g20576 | 6:9,423,301-9,426,436 | - | C2H6g13299 | CX6g044935 | LOC_Os06g19740 | Os06g0301400 | - | Detail |
| C1H6g07716 | 6:9,427,805-9,428,371 | + | - | CX6g044975 | LOC_Os06g19750 | Os06g0301500 | - | Detail |
| C1H6g09002 | 6:9,433,843-9,435,687 | - | C2H6g05182 | - | LOC_Os06g19740 | Os06g0301400 | - | Detail |
| C1H6g06926 | 6:9,460,816-9,465,080 | + | C2H6g25869 | CX6g042957 | LOC_Os06g19800 | Os06g0302000 | - | Detail |
| C1H6g26203 | 6:9,470,551-9,471,390 | + | C2H6g25869 | CX6g042957 | LOC_Os06g19800 | Os06g0302650 | - | Detail |
| C1H6g21217 | 6:9,501,937-9,503,319 | + | - | - | - | Os06g0303400 | - | Detail |
| C1H6g23546 | 6:9,509,293-9,521,525 | + | C2H6g30287 | CX6g043293 | LOC_Os06g19960 | Os06g0303400 | - | Detail |
| C1H6g18924 | 6:9,532,052-9,533,185 | + | C2H6g19345 | CX6g043277 | LOC_Os06g19980 | Os06g0303700 | - | Detail |
| C1H6g02314 | 6:9,536,077-9,539,807 | + | - | CX6g043277 | LOC_Os06g19980 | - | - | Detail |
| C1H6g02136 | 6:9,540,852-9,543,236 | + | C2H6g10205 | CX6g041533 | LOC_Os06g19990 | Os06g0303800 | - | Detail |
| C1H6g14279 | 6:9,556,404-9,557,000 | - | C2H6g00381 | CX6g045366 | - | Os06g0304300 | - | Detail |
| C1H6g02911 | 6:9,561,178-9,562,676 | + | C2H6g02144 | CX6g041211 | LOC_Os06g20030 | Os06g0304500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025944 | 3:30,216,464-30,216,910 | - | C1H3g29791 | - | - | Os03g0748750 | - | Detail |
| CX3g028895 | 3:30,242,405-30,242,671 | + | C1H3g08111 | C2H3g28162 | LOC_Os03g56784 | Os03g0780350 | - | Detail |
| CX3g025581 | 3:30,244,035-30,246,097 | - | C1H3g23563 | C2H3g20617 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| CX3g026219 | 3:30,248,863-30,253,402 | + | C1H3g23600 | C2H3g18001 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| CX3g030860 | 3:30,254,609-30,257,265 | + | C1H3g17595 | C2H3g14864 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| CX3g026170 | 3:30,259,644-30,261,029 | + | C1H3g26439 | C2H3g16433 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| CX3g028624 | 3:30,262,741-30,265,043 | - | C1H3g14922 | C2H3g03306 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| CX3g030035 | 3:30,266,478-30,269,758 | - | C1H3g04528 | C2H3g10423 | LOC_Os03g56840 | Os03g0781000 | - | Detail |
| CX3g028006 | 3:30,270,442-30,273,006 | + | C1H3g00697 | C2H3g00662 | LOC_Os03g56850 | Os03g0781100 | - | Detail |
| CX3g031346 | 3:30,275,155-30,275,834 | - | C1H3g00675 | C2H3g16006 | LOC_Os03g56860 | Os03g0781300 | - | Detail |
| CX3g029784 | 3:30,276,729-30,278,572 | - | C1H3g13066 | C2H3g09130 | LOC_Os03g56869 | Os03g0781400 | - | Detail |
| CX3g025012 | 3:30,281,143-30,281,649 | - | - | C2H3g00286 | LOC_Os03g56890 | Os03g0781600 | - | Detail |
| CX3g028940 | 3:30,283,652-30,284,973 | - | C1H3g04826 | C2H3g00286 | LOC_Os03g56900 | Os03g0781700 | - | Detail |
| CX3g026580 | 3:30,294,457-30,294,945 | + | - | - | LOC_Os03g56930 | Os03g0782200 | - | Detail |
| CX3g031282 | 3:30,300,392-30,300,751 | - | - | - | - | - | - | Detail |
| CX3g026212 | 3:30,305,625-30,307,365 | + | C1H3g18147 | C2H3g19846 | LOC_Os03g56950 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g026808 | 3:30,315,505-30,317,441 | - | C1H3g10536 | C2H3g26278 | LOC_Os03g56960 | Os03g0782900 | - | Detail |
| CX3g030659 | 3:30,317,806-30,322,307 | + | C1H3g29435 | C2H3g17813 | LOC_Os03g56970 | Os03g0783000 | - | Detail |
| CX3g025708 | 3:30,327,793-30,328,041 | + | - | - | - | - | - | Detail |
| CX3g025367 | 3:30,339,798-30,340,244 | - | - | - | - | - | - | Detail |