| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g10462 | 7:14,419,214-14,420,446 | + | C1H7g00019 | CX7g048970 | LOC_Os07g29760 | Os07g0480900 | - | Detail |
| C2H7g05929 | 7:14,423,723-14,430,878 | + | C1H7g31797 | - | LOC_Os07g29770 | Os07g0481000 | - | Detail |
| C2H7g12520 | 7:14,429,832-14,432,185 | - | C1H7g17042 | CX7g047934 | LOC_Os07g29780 | Os07g0481100 | - | Detail |
| C2H7g04918 | 7:14,436,867-14,437,607 | + | - | - | - | - | - | Detail |
| C2H7g17914 | 7:14,439,990-14,442,145 | + | C1H7g08825 | CX7g047784 | LOC_Os07g29794 | Os07g0481200 | - | Detail |
| C2H7g08081 | 7:14,447,571-14,451,581 | + | C1H7g01187 | CX7g048988 | LOC_Os07g29810 | Os07g0481300 | - | Detail |
| C2H7g20657 | 7:14,453,563-14,458,844 | - | C1H7g17999 | CX7g048988 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| C2H7g01767 | 7:14,466,272-14,467,195 | + | C1H7g20643 | CX7g049622 | LOC_Os07g31070 | Os07g0482433 | - | Detail |
| C2H7g00792 | 7:14,471,438-14,473,257 | + | C1H7g12460 | CX7g046236 | LOC_Os07g29830 | Os07g0492966 | - | Detail |
| C2H7g03865 | 7:14,484,618-14,487,304 | - | C1H7g25439 | CX7g046285 | LOC_Os07g29960 | Os07g0482900 | - | Detail |
| C2H7g23671 | 7:14,508,415-14,508,807 | + | - | - | LOC_Os07g34450 | - | - | Detail |
| C2H7g21827 | 7:14,512,350-14,513,451 | + | C1H7g27243 | - | - | Os07g0483400 | - | Detail |
| C2H7g12658 | 7:14,515,686-14,518,721 | - | C1H7g00758 | CX7g046925 | LOC_Os07g30020 | Os07g0483500 | - | Detail |
| C2H7g24842 | 7:14,539,940-14,541,355 | + | C1H7g20920 | CX7g049843 | LOC_Os07g30090 | Os07g0484200 | - | Detail |
| C2H7g15400 | 7:14,543,585-14,555,548 | - | C1H7g24417 | CX7g047443 | LOC_Os07g30100 | Os07g0484300 | - | Detail |
| C2H7g08443 | 7:14,579,236-14,582,952 | + | C1H7g17450 | CX7g046292 | LOC_Os07g30110 | Os07g0484500 | - | Detail |
| C2H7g28168 | 7:14,585,925-14,593,326 | - | C1H7g29847 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C2H7g17517 | 7:14,598,415-14,599,725 | - | C1H7g20780 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C2H7g13834 | 7:14,615,460-14,617,479 | + | C1H7g14423 | CX7g047351 | LOC_Os07g30160 | Os07g0485000 | - | Detail |
| C2H7g08877 | 7:14,617,734-14,620,873 | - | C1H7g26216 | CX7g048078 | LOC_Os07g30170 | Os07g0485100 | Osb-UP, Osbeta-UP, Osβ-UP | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030664 | 3:30,031,809-30,034,528 | + | C1H3g30894 | C2H3g25642 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| CX3g029071 | 3:30,035,959-30,039,290 | + | C1H3g19822 | C2H3g18914 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| CX3g026587 | 3:30,041,424-30,042,842 | + | C1H3g04719 | C2H3g00007 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| CX3g026064 | 3:30,045,183-30,051,314 | + | C1H3g16991 | C2H3g28249 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| CX3g028659 | 3:30,052,255-30,054,292 | - | C1H3g04454 | C2H3g15730 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| CX3g030966 | 3:30,062,563-30,063,858 | - | - | - | LOC_Os03g56500 | Os03g0776400 | - | Detail |
| CX3g028268 | 3:30,068,787-30,069,098 | - | - | - | LOC_Os03g64160 | - | - | Detail |
| CX3g029001 | 3:30,071,499-30,071,747 | + | - | - | - | - | - | Detail |
| CX3g025698 | 3:30,077,878-30,078,380 | + | C1H3g02970 | C2H3g19254 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| CX3g029754 | 3:30,090,289-30,092,067 | + | C1H3g04407 | C2H3g09900 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| CX3g026134 | 3:30,094,010-30,096,760 | - | C1H3g14095 | C2H3g20066 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| CX3g028274 | 3:30,098,357-30,100,094 | - | C1H3g29609 | C2H3g09685 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| CX3g026442 | 3:30,102,784-30,105,277 | + | C1H3g10794 | C2H3g13878 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| CX3g029819 | 3:30,105,770-30,111,685 | - | C1H3g30679 | C2H3g10928 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| CX3g031249 | 3:30,117,810-30,125,280 | + | C1H3g05671 | C2H3g07763 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| CX3g031326 | 3:30,125,950-30,126,660 | - | C1H3g25718 | - | LOC_Os03g56670 | Os03g0778100 | OsPS1-F | Detail |
| CX3g026142 | 3:30,173,681-30,174,301 | + | - | - | LOC_Os03g56700 | Os03g0778400 | - | Detail |
| CX3g027209 | 3:30,211,854-30,212,204 | - | - | C2H3g01525 | - | - | - | Detail |
| CX3g028592 | 3:30,212,667-30,212,828 | + | - | - | - | Os03g0264075 | - | Detail |
| CX3g026413 | 3:30,212,994-30,213,269 | - | - | - | - | - | - | Detail |