| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19784 | 4:27,335,340-27,336,862 | - | C2H4g04663 | CX4g035396 | LOC_Os04g52720 | Os04g0617900 | - | Detail |
| C1H4g16144 | 4:27,341,358-27,345,597 | + | C2H4g20761 | CX4g036359 | - | - | - | Detail |
| C1H4g21738 | 4:27,347,008-27,350,734 | + | C2H4g14147 | CX4g032842 | LOC_Os04g52730 | Os04g0618200 | - | Detail |
| C1H4g28262 | 4:27,354,171-27,354,467 | + | C2H4g20866 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C1H4g01403 | 4:27,355,456-27,359,541 | - | C2H4g09538 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C1H4g16234 | 4:27,361,688-27,362,774 | + | C2H4g06850 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C1H4g28199 | 4:27,363,964-27,368,068 | - | C2H4g10397 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C1H4g22303 | 4:27,382,282-27,385,360 | - | C2H4g00816 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C1H4g07288 | 4:27,389,779-27,391,289 | + | - | - | LOC_Os04g52820 | - | - | Detail |
| C1H4g06933 | 4:27,391,734-27,392,098 | + | C2H4g08987 | CX4g032452 | - | - | - | Detail |
| C1H4g18636 | 4:27,400,694-27,403,858 | + | C2H4g28780 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C1H4g13931 | 4:27,404,926-27,408,291 | - | C2H4g02197 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C1H4g15202 | 4:27,414,637-27,417,536 | + | C2H4g23444 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C1H4g24641 | 4:27,419,171-27,421,705 | - | C2H4g18841 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C1H4g04907 | 4:27,425,704-27,428,943 | - | C2H4g25907 | - | - | - | - | Detail |
| C1H4g18235 | 4:27,441,312-27,446,700 | + | C2H4g06612 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C1H4g18046 | 4:27,447,425-27,459,871 | - | C2H4g03746 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C1H4g10267 | 4:27,463,348-27,464,456 | - | - | - | - | - | - | Detail |
| C1H4g11396 | 4:27,467,836-27,470,683 | + | C2H4g02835 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C1H4g16306 | 4:27,471,210-27,471,907 | - | - | - | LOC_Os04g52930 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030664 | 3:30,031,809-30,034,528 | + | C1H3g30894 | C2H3g25642 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| CX3g029071 | 3:30,035,959-30,039,290 | + | C1H3g19822 | C2H3g18914 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| CX3g026587 | 3:30,041,424-30,042,842 | + | C1H3g04719 | C2H3g00007 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| CX3g026064 | 3:30,045,183-30,051,314 | + | C1H3g16991 | C2H3g28249 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| CX3g028659 | 3:30,052,255-30,054,292 | - | C1H3g04454 | C2H3g15730 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| CX3g030966 | 3:30,062,563-30,063,858 | - | - | - | LOC_Os03g56500 | Os03g0776400 | - | Detail |
| CX3g028268 | 3:30,068,787-30,069,098 | - | - | - | LOC_Os03g64160 | - | - | Detail |
| CX3g029001 | 3:30,071,499-30,071,747 | + | - | - | - | - | - | Detail |
| CX3g025698 | 3:30,077,878-30,078,380 | + | C1H3g02970 | C2H3g19254 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| CX3g029754 | 3:30,090,289-30,092,067 | + | C1H3g04407 | C2H3g09900 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| CX3g026134 | 3:30,094,010-30,096,760 | - | C1H3g14095 | C2H3g20066 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| CX3g028274 | 3:30,098,357-30,100,094 | - | C1H3g29609 | C2H3g09685 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| CX3g026442 | 3:30,102,784-30,105,277 | + | C1H3g10794 | C2H3g13878 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| CX3g029819 | 3:30,105,770-30,111,685 | - | C1H3g30679 | C2H3g10928 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| CX3g031249 | 3:30,117,810-30,125,280 | + | C1H3g05671 | C2H3g07763 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| CX3g031326 | 3:30,125,950-30,126,660 | - | C1H3g25718 | - | LOC_Os03g56670 | Os03g0778100 | OsPS1-F | Detail |
| CX3g026142 | 3:30,173,681-30,174,301 | + | - | - | LOC_Os03g56700 | Os03g0778400 | - | Detail |
| CX3g027209 | 3:30,211,854-30,212,204 | - | - | C2H3g01525 | - | - | - | Detail |
| CX3g028592 | 3:30,212,667-30,212,828 | + | - | - | - | Os03g0264075 | - | Detail |
| CX3g026413 | 3:30,212,994-30,213,269 | - | - | - | - | - | - | Detail |