| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11559 | 6:7,255,330-7,270,335 | + | C2H6g03619 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C1H6g18024 | 6:7,271,353-7,279,165 | - | C2H6g01049 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C1H6g12696 | 6:7,308,126-7,312,190 | + | - | - | - | - | - | Detail |
| C1H6g12074 | 6:7,323,736-7,324,242 | - | C2H6g10609 | CX6g041615 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C1H6g28805 | 6:7,357,500-7,361,290 | - | C2H6g15261 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C1H6g14061 | 6:7,506,785-7,508,766 | + | C2H6g11848 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C1H6g03979 | 6:7,524,756-7,530,758 | + | C2H6g27689 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C1H6g31080 | 6:7,529,438-7,529,905 | - | - | - | - | Os06g0264366 | - | Detail |
| C1H6g06916 | 6:7,545,022-7,549,944 | + | C2H6g23695 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C1H6g11951 | 6:7,557,071-7,558,213 | - | C2H6g28756 | CX6g045844 | LOC_Os06g15400 | Os06g0264800 | - | Detail |
| C1H6g10281 | 6:7,558,660-7,563,107 | - | C2H6g22525 | CX6g045672 | LOC_Os06g15410 | Os06g0264900 | - | Detail |
| C1H6g21227 | 6:7,564,056-7,570,765 | - | C2H6g24712 | CX6g044119 | LOC_Os06g15420 | Os06g0265000 | ASN, OsASN2, OsAS, OsAS2, AS2 | Detail |
| C1H6g12077 | 6:7,574,105-7,576,075 | - | C2H6g21757 | CX6g045084 | LOC_Os06g15480 | Os06g0265400 | OsbZIP47 | Detail |
| C1H6g02155 | 6:7,590,434-7,591,816 | + | C2H6g27056 | CX6g043750 | LOC_Os06g15550 | Os06g0265900 | - | Detail |
| C1H6g31082 | 6:7,597,016-7,598,154 | + | - | - | LOC_Os06g15580 | Os06g0266133 | - | Detail |
| C1H6g01727 | 6:7,597,701-7,598,582 | - | C2H6g05541 | - | LOC_Os06g15590 | Os06g0266266 | - | Detail |
| C1H6g06570 | 6:7,599,808-7,600,707 | - | C2H6g11511 | CX6g043643 | LOC_Os06g15600 | Os06g0266400 | - | Detail |
| C1H6g23821 | 6:7,605,503-7,605,939 | - | C2H6g26645 | CX6g041878 | LOC_Os06g15620 | Os06g0266800 | OsGSR1, GW6, OsGASR7 | Detail |
| C1H6g29835 | 6:7,630,855-7,631,136 | - | - | - | - | - | - | Detail |
| C1H6g09354 | 6:7,632,225-7,633,907 | - | C2H6g09819 | CX6g042875 | LOC_Os06g15680 | Os06g0267400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030664 | 3:30,031,809-30,034,528 | + | C1H3g30894 | C2H3g25642 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| CX3g029071 | 3:30,035,959-30,039,290 | + | C1H3g19822 | C2H3g18914 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| CX3g026587 | 3:30,041,424-30,042,842 | + | C1H3g04719 | C2H3g00007 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| CX3g026064 | 3:30,045,183-30,051,314 | + | C1H3g16991 | C2H3g28249 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| CX3g028659 | 3:30,052,255-30,054,292 | - | C1H3g04454 | C2H3g15730 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| CX3g030966 | 3:30,062,563-30,063,858 | - | - | - | LOC_Os03g56500 | Os03g0776400 | - | Detail |
| CX3g028268 | 3:30,068,787-30,069,098 | - | - | - | LOC_Os03g64160 | - | - | Detail |
| CX3g029001 | 3:30,071,499-30,071,747 | + | - | - | - | - | - | Detail |
| CX3g025698 | 3:30,077,878-30,078,380 | + | C1H3g02970 | C2H3g19254 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| CX3g029754 | 3:30,090,289-30,092,067 | + | C1H3g04407 | C2H3g09900 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| CX3g026134 | 3:30,094,010-30,096,760 | - | C1H3g14095 | C2H3g20066 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| CX3g028274 | 3:30,098,357-30,100,094 | - | C1H3g29609 | C2H3g09685 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| CX3g026442 | 3:30,102,784-30,105,277 | + | C1H3g10794 | C2H3g13878 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| CX3g029819 | 3:30,105,770-30,111,685 | - | C1H3g30679 | C2H3g10928 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| CX3g031249 | 3:30,117,810-30,125,280 | + | C1H3g05671 | C2H3g07763 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| CX3g031326 | 3:30,125,950-30,126,660 | - | C1H3g25718 | - | LOC_Os03g56670 | Os03g0778100 | OsPS1-F | Detail |
| CX3g026142 | 3:30,173,681-30,174,301 | + | - | - | LOC_Os03g56700 | Os03g0778400 | - | Detail |
| CX3g027209 | 3:30,211,854-30,212,204 | - | - | C2H3g01525 | - | - | - | Detail |
| CX3g028592 | 3:30,212,667-30,212,828 | + | - | - | - | Os03g0264075 | - | Detail |
| CX3g026413 | 3:30,212,994-30,213,269 | - | - | - | - | - | - | Detail |