| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03322 | 3:27,340,934-27,343,315 | - | C1H3g30625 | CX3g030181 | LOC_Os03g51950 | Os03g0729200 | - | Detail |
| C2H3g24100 | 3:27,345,488-27,347,402 | - | C1H3g13523 | CX3g029650 | LOC_Os03g51960 | Os03g0729300 | - | Detail |
| C2H3g29250 | 3:27,369,741-27,373,697 | + | C1H3g25309 | CX3g026395 | LOC_Os03g51970 | Os03g0729500 | GRF6, OsGRF6 | Detail |
| C2H3g12464 | 3:27,375,331-27,376,252 | - | C1H3g03104 | - | - | - | - | Detail |
| C2H3g18708 | 3:27,376,638-27,379,340 | + | C1H3g10749 | CX3g025921 | LOC_Os03g51984 | Os03g0729700 | - | Detail |
| C2H3g00085 | 3:27,384,328-27,384,774 | + | C1H3g20671 | CX3g030041 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| C2H3g30065 | 3:27,384,854-27,386,330 | + | C1H3g23285 | CX3g030041 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| C2H3g12843 | 3:27,386,439-27,391,421 | - | C1H3g08051 | CX3g029030 | LOC_Os03g52000 | Os03g0729900 | - | Detail |
| C2H3g06578 | 3:27,394,137-27,395,989 | - | C1H3g02659 | CX3g026263 | LOC_Os03g52010 | Os03g0730000 | - | Detail |
| C2H3g03305 | 3:27,404,886-27,410,696 | + | C1H3g27135 | CX3g025486 | LOC_Os03g52040 | Os03g0730400 | - | Detail |
| C2H3g11768 | 3:27,417,648-27,422,103 | + | C1H3g19587 | CX3g025486 | LOC_Os03g52070 | Os03g0730500 | - | Detail |
| C2H3g24985 | 3:27,427,449-27,433,104 | + | C1H3g15717 | CX3g025486 | LOC_Os03g52080 | Os03g0730700 | - | Detail |
| C2H3g15444 | 3:27,435,408-27,458,540 | - | C1H3g25117 | CX3g030109 | LOC_Os03g52090 | Os03g0730800 | - | Detail |
| C2H3g30622 | 3:27,461,075-27,464,152 | + | C1H3g02569 | CX3g024994 | LOC_Os03g52120 | Os03g0731050 | - | Detail |
| C2H3g14888 | 3:27,464,946-27,465,970 | + | C1H3g13296 | CX3g027975 | LOC_Os03g52130 | Os03g0731100 | - | Detail |
| C2H3g15813 | 3:27,470,789-27,480,513 | + | C1H3g30965 | CX3g026280 | LOC_Os03g52150 | Os03g0731500 | - | Detail |
| C2H3g18334 | 3:27,480,972-27,482,527 | + | C1H3g29781 | CX3g025632 | LOC_Os03g52160 | Os03g0731800 | - | Detail |
| C2H3g17469 | 3:27,482,637-27,485,949 | - | C1H3g24484 | CX3g027993 | LOC_Os03g52170 | Os03g0731900 | OsHMBPP, LAS1, LAS1/OsHMBPP | Detail |
| C2H3g17794 | 3:27,489,179-27,493,171 | - | C1H3g05748 | CX3g028410 | LOC_Os03g52180 | Os03g0732000 | OsIspH2 | Detail |
| C2H3g20028 | 3:27,520,491-27,530,041 | + | C1H3g07434 | CX3g027773 | LOC_Os03g52239 | Os03g0732100 | ROSES1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028014 | 3:29,894,887-29,896,914 | + | C1H3g28844 | C2H3g11146 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| CX3g027206 | 3:29,899,387-29,901,481 | - | C1H3g28844 | C2H3g19447 | LOC_Os03g56180 | Os03g0772700 | - | Detail |
| CX3g028141 | 3:29,903,683-29,905,224 | + | C1H3g06172 | C2H3g15287 | LOC_Os03g56190 | Os03g0772800 | - | Detail |
| CX3g028682 | 3:29,905,871-29,906,599 | - | - | - | LOC_Os03g56200 | Os03g0772900 | - | Detail |
| CX3g029162 | 3:29,916,433-29,917,005 | - | - | - | LOC_Os03g56220 | Os03g0773000 | - | Detail |
| CX3g026369 | 3:29,917,333-29,917,824 | + | - | - | - | Os03g0773050 | - | Detail |
| CX3g029781 | 3:29,924,603-29,930,373 | - | C1H3g27520 | C2H3g23997 | LOC_Os03g56234 | Os03g0773100 | - | Detail |
| CX3g025341 | 3:29,932,206-29,932,653 | - | C1H11g31625 | C2H11g05228 | LOC_Os03g56241 | Os03g0773150 | - | Detail |
| CX3g031131 | 3:29,933,513-29,937,815 | - | C1H3g12061 | C2H3g30456 | LOC_Os03g56250 | Os03g0773300 | - | Detail |
| CX3g027730 | 3:29,948,933-29,956,391 | + | C1H3g19745 | C2H3g15647 | LOC_Os03g56260 | Os03g0773600 | - | Detail |
| CX3g029516 | 3:29,964,446-29,967,850 | + | C1H3g13238 | C2H3g25453 | LOC_Os03g56270 | Os03g0773700 | - | Detail |
| CX3g025155 | 3:29,972,239-29,975,058 | - | C1H3g14912 | C2H3g25804 | LOC_Os03g56280 | Os03g0773800 | - | Detail |
| CX3g026775 | 3:29,976,536-29,979,680 | - | C1H3g03566 | C2H3g28843 | LOC_Os03g56300 | Os03g0774200 | - | Detail |
| CX3g031127 | 3:29,980,990-29,987,872 | - | C1H3g22996 | C2H3g04435 | LOC_Os03g56310 | Os03g0774300 | - | Detail |
| CX3g025412 | 3:29,991,151-29,992,862 | + | C1H3g19261 | C2H3g26015 | LOC_Os03g56320 | Os03g0774400 | - | Detail |
| CX3g027698 | 3:30,007,601-30,010,154 | - | C1H3g10204 | C2H3g25248 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| CX3g026008 | 3:30,012,659-30,016,622 | + | C1H3g14191 | C2H3g05048 | LOC_Os03g56380 | Os03g0775200 | - | Detail |
| CX3g026938 | 3:30,017,789-30,020,966 | + | C1H3g27485 | C2H3g23811 | LOC_Os03g56390 | Os03g0775300 | - | Detail |
| CX3g030898 | 3:30,021,510-30,023,751 | - | C1H3g13212 | C2H3g12716 | LOC_Os03g56400 | Os03g0775400 | - | Detail |
| CX3g030889 | 3:30,024,756-30,028,048 | + | C1H3g05680 | C2H3g27854 | LOC_Os03g56410 | Os03g0775500 | - | Detail |