| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19774 | 1:31,558,335-31,558,910 | - | C2H1g21565 | CX1g001275 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| C1H1g14773 | 1:31,570,139-31,570,813 | + | C2H1g19363 | CX1g002960 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| C1H1g29926 | 1:31,574,562-31,577,996 | + | C2H1g10096 | CX1g003525 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| C1H1g29563 | 1:31,578,140-31,580,710 | - | C2H1g19797 | CX1g003586 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| C1H1g16875 | 1:31,583,436-31,585,130 | - | C2H1g10064 | CX1g004163 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| C1H1g09267 | 1:31,587,352-31,590,262 | - | C2H1g01874 | CX1g006982 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| C1H1g18254 | 1:31,591,978-31,593,781 | + | C2H1g04373 | CX1g004599 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| C1H1g00383 | 1:31,595,780-31,599,262 | - | C2H1g19266 | CX1g001311 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| C1H1g00574 | 1:31,603,439-31,609,060 | + | C2H1g14897 | CX1g004790 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| C1H1g31694 | 1:31,623,931-31,629,351 | + | C2H1g11131 | CX1g000601 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| C1H1g07002 | 1:31,645,583-31,650,779 | + | C2H1g22191 | CX1g006439 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| C1H1g10107 | 1:31,651,133-31,653,130 | + | C2H1g03571 | CX1g006609 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| C1H1g13635 | 1:31,653,422-31,656,214 | - | C2H1g17085 | CX1g003404 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| C1H1g07003 | 1:31,660,931-31,664,136 | + | C2H1g00983 | CX1g003333 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| C1H1g07552 | 1:31,665,317-31,665,983 | + | C2H1g24837 | CX1g005332 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| C1H1g26345 | 1:31,666,736-31,670,635 | - | C2H1g22767 | CX1g001176 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| C1H1g02922 | 1:31,671,706-31,672,679 | - | C2H1g05497 | CX1g000140 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| C1H1g09497 | 1:31,673,488-31,680,561 | - | C2H1g26726 | CX1g003313 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| C1H1g22933 | 1:31,682,588-31,686,819 | - | C2H1g11920 | CX1g003450 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| C1H1g08789 | 1:31,701,594-31,702,292 | + | C2H1g11202 | - | LOC_Os01g61750 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028014 | 3:29,894,887-29,896,914 | + | C1H3g28844 | C2H3g11146 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| CX3g027206 | 3:29,899,387-29,901,481 | - | C1H3g28844 | C2H3g19447 | LOC_Os03g56180 | Os03g0772700 | - | Detail |
| CX3g028141 | 3:29,903,683-29,905,224 | + | C1H3g06172 | C2H3g15287 | LOC_Os03g56190 | Os03g0772800 | - | Detail |
| CX3g028682 | 3:29,905,871-29,906,599 | - | - | - | LOC_Os03g56200 | Os03g0772900 | - | Detail |
| CX3g029162 | 3:29,916,433-29,917,005 | - | - | - | LOC_Os03g56220 | Os03g0773000 | - | Detail |
| CX3g026369 | 3:29,917,333-29,917,824 | + | - | - | - | Os03g0773050 | - | Detail |
| CX3g029781 | 3:29,924,603-29,930,373 | - | C1H3g27520 | C2H3g23997 | LOC_Os03g56234 | Os03g0773100 | - | Detail |
| CX3g025341 | 3:29,932,206-29,932,653 | - | C1H11g31625 | C2H11g05228 | LOC_Os03g56241 | Os03g0773150 | - | Detail |
| CX3g031131 | 3:29,933,513-29,937,815 | - | C1H3g12061 | C2H3g30456 | LOC_Os03g56250 | Os03g0773300 | - | Detail |
| CX3g027730 | 3:29,948,933-29,956,391 | + | C1H3g19745 | C2H3g15647 | LOC_Os03g56260 | Os03g0773600 | - | Detail |
| CX3g029516 | 3:29,964,446-29,967,850 | + | C1H3g13238 | C2H3g25453 | LOC_Os03g56270 | Os03g0773700 | - | Detail |
| CX3g025155 | 3:29,972,239-29,975,058 | - | C1H3g14912 | C2H3g25804 | LOC_Os03g56280 | Os03g0773800 | - | Detail |
| CX3g026775 | 3:29,976,536-29,979,680 | - | C1H3g03566 | C2H3g28843 | LOC_Os03g56300 | Os03g0774200 | - | Detail |
| CX3g031127 | 3:29,980,990-29,987,872 | - | C1H3g22996 | C2H3g04435 | LOC_Os03g56310 | Os03g0774300 | - | Detail |
| CX3g025412 | 3:29,991,151-29,992,862 | + | C1H3g19261 | C2H3g26015 | LOC_Os03g56320 | Os03g0774400 | - | Detail |
| CX3g027698 | 3:30,007,601-30,010,154 | - | C1H3g10204 | C2H3g25248 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| CX3g026008 | 3:30,012,659-30,016,622 | + | C1H3g14191 | C2H3g05048 | LOC_Os03g56380 | Os03g0775200 | - | Detail |
| CX3g026938 | 3:30,017,789-30,020,966 | + | C1H3g27485 | C2H3g23811 | LOC_Os03g56390 | Os03g0775300 | - | Detail |
| CX3g030898 | 3:30,021,510-30,023,751 | - | C1H3g13212 | C2H3g12716 | LOC_Os03g56400 | Os03g0775400 | - | Detail |
| CX3g030889 | 3:30,024,756-30,028,048 | + | C1H3g05680 | C2H3g27854 | LOC_Os03g56410 | Os03g0775500 | - | Detail |