| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19977 | 3:28,640,498-28,645,790 | + | C1H3g03734 | CX3g028780 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| C2H3g18083 | 3:28,647,615-28,650,626 | + | C1H3g12190 | CX3g025340 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| C2H3g16234 | 3:28,653,088-28,653,723 | - | C1H3g12511 | CX3g025542 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| C2H3g10389 | 3:28,668,718-28,675,374 | + | C1H3g28552 | CX3g030315 | LOC_Os03g55130 | Os03g0758600 | - | Detail |
| C2H3g16550 | 3:28,676,078-28,680,557 | + | C1H3g29486 | CX3g029765 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| C2H3g15196 | 3:28,682,577-28,684,823 | + | C1H3g11985 | CX3g027861 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| C2H3g06066 | 3:28,685,534-28,688,468 | + | C1H3g25907 | CX3g030192 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| C2H3g18373 | 3:28,689,779-28,690,405 | + | C1H3g02522 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C2H3g20753 | 3:28,690,463-28,693,207 | + | C1H3g14505 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C2H3g12552 | 3:28,693,737-28,696,769 | - | C1H3g16488 | CX3g028552 | LOC_Os03g55180 | Os03g0759000 | - | Detail |
| C2H3g13001 | 3:28,703,247-28,705,175 | + | C1H3g23489 | CX3g026932 | LOC_Os03g55200 | Os03g0759500 | OsORC5 | Detail |
| C2H3g21370 | 3:28,715,870-28,720,301 | + | C1H3g02617 | CX3g030027 | LOC_Os03g55220 | Os03g0759700 | - | Detail |
| C2H3g27540 | 3:28,734,184-28,735,038 | + | C1H3g22708 | CX3g027892 | LOC_Os03g55230 | Os03g0760000 | - | Detail |
| C2H3g20624 | 3:28,739,877-28,743,239 | + | C1H3g12152 | CX3g030489 | LOC_Os03g55240 | Os03g0760200 | Bel, CYP81A6 | Detail |
| C2H3g09774 | 3:28,745,254-28,747,651 | + | C1H3g10305 | CX3g026015 | LOC_Os03g55250 | Os03g0760300 | - | Detail |
| C2H3g11478 | 3:28,749,351-28,752,939 | + | C1H3g04584 | CX3g029417 | LOC_Os03g55260 | Os03g0760500 | - | Detail |
| C2H3g24493 | 3:28,753,411-28,756,373 | - | C1H3g09452 | CX3g029986 | LOC_Os03g55270 | Os03g0760600 | - | Detail |
| C2H3g08027 | 3:28,759,062-28,762,295 | + | C1H3g27656 | CX3g030209 | LOC_Os03g55280 | Os03g0760700 | - | Detail |
| C2H3g21109 | 3:28,763,895-28,764,282 | - | C1H3g11879 | CX3g027262 | LOC_Os03g55290 | Os03g0760800 | GASR1, OsGASR1 | Detail |
| C2H3g17978 | 3:28,767,770-28,769,312 | - | C1H3g27713 | CX3g026450 | LOC_Os03g55310 | Os03g0761000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025162 | 3:29,653,593-29,653,856 | + | - | - | LOC_Os03g55720 | Os03g0765900 | - | Detail |
| CX3g026492 | 3:29,654,505-29,660,304 | - | C1H3g27991 | C2H3g07544 | LOC_Os03g55730 | Os03g0766000 | - | Detail |
| CX3g029380 | 3:29,663,452-29,663,604 | + | - | - | - | - | - | Detail |
| CX3g026186 | 3:29,671,562-29,677,402 | + | C1H3g28511 | C2H3g01139 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| CX3g025741 | 3:29,678,267-29,678,512 | + | - | - | LOC_Os03g55770 | Os03g0766600 | - | Detail |
| CX3g030741 | 3:29,680,207-29,680,443 | + | C1H3g11551 | - | LOC_Os03g55776 | Os03g0766800 | - | Detail |
| CX3g026597 | 3:29,681,320-29,683,513 | + | C1H3g11551 | C2H3g02791 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| CX3g025516 | 3:29,685,842-29,686,012 | - | - | - | - | - | - | Detail |
| CX3g026072 | 3:29,687,223-29,688,761 | - | C1H3g31142 | C2H3g16646 | LOC_Os03g55800 | Os03g0767000 | AOS1, OsAOS, OsAOS1, CYP74A1 | Detail |
| CX3g029042 | 3:29,692,478-29,692,651 | + | - | - | - | - | - | Detail |
| CX3g026749 | 3:29,695,466-29,698,194 | - | C1H3g16165 | C2H3g02036 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| CX3g027804 | 3:29,702,948-29,706,078 | + | C1H3g10730 | C2H3g25481 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| CX3g030413 | 3:29,706,397-29,707,287 | - | C1H3g13212 | C2H3g17418 | LOC_Os03g55840 | Os03g0767700 | - | Detail |
| CX3g028593 | 3:29,708,966-29,710,984 | + | C1H3g31861 | C2H3g21501 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| CX3g024946 | 3:29,712,225-29,713,105 | + | C1H3g14127 | C2H3g01498 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| CX3g029897 | 3:29,719,833-29,720,255 | + | - | - | LOC_Os03g55880 | Os03g0768900 | - | Detail |
| CX3g028693 | 3:29,721,276-29,724,849 | - | C1H3g26336 | C2H3g08266 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| CX3g027389 | 3:29,732,912-29,737,328 | - | C1H3g24628 | C2H3g19989 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| CX3g028168 | 3:29,738,326-29,739,831 | - | C1H3g25789 | C2H3g27533 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| CX3g028504 | 3:29,748,792-29,751,161 | + | C1H3g19145 | C2H3g12948 | LOC_Os03g55950 | Os03g0769400 | - | Detail |