| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g15993 | 3:22,115,293-22,115,711 | - | C1H3g12759 | CX3g025570 | LOC_Os03g42830 | Os03g0626700 | - | Detail |
| C2H3g05891 | 3:22,130,032-22,136,693 | + | C1H3g25690 | CX3g027400 | LOC_Os03g42840 | Os03g0626800 | - | Detail |
| C2H3g14313 | 3:22,147,299-22,152,842 | + | C1H3g11462 | CX3g025991 | LOC_Os03g42880 | Os03g0627300 | - | Detail |
| C2H3g10704 | 3:22,168,613-22,177,935 | + | C1H3g14647 | CX3g026886 | LOC_Os03g42900 | Os03g0627500 | - | Detail |
| C2H3g00920 | 3:22,202,525-22,211,257 | + | C1H3g00894 | CX3g029429 | LOC_Os03g43010 | Os03g0628800 | - | Detail |
| C2H3g10580 | 3:22,211,712-22,215,531 | - | C1H3g00450 | CX3g028608 | LOC_Os03g43020 | Os03g0628900 | - | Detail |
| C2H3g10629 | 3:22,232,410-22,238,032 | - | C1H3g29886 | CX3g028022 | LOC_Os03g43360 | Os03g0632800 | - | Detail |
| C2H3g15051 | 3:22,249,218-22,249,847 | + | C1H3g16883 | CX3g028072 | LOC_Os03g43390 | Os03g0633100 | - | Detail |
| C2H3g09650 | 3:22,254,904-22,256,547 | + | C1H3g19463 | CX3g028072 | LOC_Os03g43390 | Os03g0633400 | - | Detail |
| C2H3g12761 | 3:22,258,346-22,260,782 | - | C1H3g27110 | CX3g031035 | LOC_Os03g43400 | Os03g0633500 | IAA11, OsIAA11 | Detail |
| C2H3g00311 | 3:22,282,216-22,283,113 | + | C1H3g24280 | CX3g030491 | LOC_Os03g43410 | Os03g0633800 | - | Detail |
| C2H3g06416 | 3:22,285,150-22,288,888 | - | C1H3g09614 | CX3g027225 | LOC_Os03g43420 | Os03g0633900 | - | Detail |
| C2H3g18903 | 3:22,289,809-22,291,776 | - | C1H3g05279 | CX3g029917 | LOC_Os03g43430 | Os03g0634000 | - | Detail |
| C2H3g00024 | 3:22,324,300-22,328,450 | - | C1H3g04577 | CX3g027002 | LOC_Os03g43480 | Os03g0635100 | RGG1 | Detail |
| C2H3g04757 | 3:22,333,516-22,334,444 | + | - | - | - | - | - | Detail |
| C2H3g07611 | 3:22,335,511-22,336,191 | + | - | - | - | - | - | Detail |
| C2H3g04692 | 3:22,336,994-22,343,782 | - | - | CX3g030328 | - | - | - | Detail |
| C2H3g22456 | 3:22,349,111-22,355,654 | - | C1H3g10790 | CX3g028287 | LOC_Os03g43510 | Os03g0635800 | - | Detail |
| C2H3g14956 | 3:22,359,937-22,360,365 | + | - | - | - | - | - | Detail |
| C2H3g29360 | 3:22,434,063-22,436,461 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025162 | 3:29,653,593-29,653,856 | + | - | - | LOC_Os03g55720 | Os03g0765900 | - | Detail |
| CX3g026492 | 3:29,654,505-29,660,304 | - | C1H3g27991 | C2H3g07544 | LOC_Os03g55730 | Os03g0766000 | - | Detail |
| CX3g029380 | 3:29,663,452-29,663,604 | + | - | - | - | - | - | Detail |
| CX3g026186 | 3:29,671,562-29,677,402 | + | C1H3g28511 | C2H3g01139 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| CX3g025741 | 3:29,678,267-29,678,512 | + | - | - | LOC_Os03g55770 | Os03g0766600 | - | Detail |
| CX3g030741 | 3:29,680,207-29,680,443 | + | C1H3g11551 | - | LOC_Os03g55776 | Os03g0766800 | - | Detail |
| CX3g026597 | 3:29,681,320-29,683,513 | + | C1H3g11551 | C2H3g02791 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| CX3g025516 | 3:29,685,842-29,686,012 | - | - | - | - | - | - | Detail |
| CX3g026072 | 3:29,687,223-29,688,761 | - | C1H3g31142 | C2H3g16646 | LOC_Os03g55800 | Os03g0767000 | AOS1, OsAOS, OsAOS1, CYP74A1 | Detail |
| CX3g029042 | 3:29,692,478-29,692,651 | + | - | - | - | - | - | Detail |
| CX3g026749 | 3:29,695,466-29,698,194 | - | C1H3g16165 | C2H3g02036 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| CX3g027804 | 3:29,702,948-29,706,078 | + | C1H3g10730 | C2H3g25481 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| CX3g030413 | 3:29,706,397-29,707,287 | - | C1H3g13212 | C2H3g17418 | LOC_Os03g55840 | Os03g0767700 | - | Detail |
| CX3g028593 | 3:29,708,966-29,710,984 | + | C1H3g31861 | C2H3g21501 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| CX3g024946 | 3:29,712,225-29,713,105 | + | C1H3g14127 | C2H3g01498 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| CX3g029897 | 3:29,719,833-29,720,255 | + | - | - | LOC_Os03g55880 | Os03g0768900 | - | Detail |
| CX3g028693 | 3:29,721,276-29,724,849 | - | C1H3g26336 | C2H3g08266 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| CX3g027389 | 3:29,732,912-29,737,328 | - | C1H3g24628 | C2H3g19989 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| CX3g028168 | 3:29,738,326-29,739,831 | - | C1H3g25789 | C2H3g27533 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| CX3g028504 | 3:29,748,792-29,751,161 | + | C1H3g19145 | C2H3g12948 | LOC_Os03g55950 | Os03g0769400 | - | Detail |