| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02770 | 2:30,253,424-30,260,808 | + | C1H2g30454 | CX2g020110 | LOC_Os02g54110 | Os02g0782100 | - | Detail |
| C2H2g28274 | 2:30,265,067-30,274,318 | - | C1H2g30222 | CX2g019882 | LOC_Os02g54120 | Os02g0782200 | - | Detail |
| C2H2g10589 | 2:30,274,286-30,275,888 | + | - | - | - | Os02g0782366 | - | Detail |
| C2H2g04470 | 2:30,275,708-30,279,705 | - | C1H2g00214 | CX2g020925 | LOC_Os02g54130 | Os02g0782300 | - | Detail |
| C2H2g11463 | 2:30,279,710-30,280,018 | - | C1H2g00214 | - | - | - | - | Detail |
| C2H2g20685 | 2:30,284,999-30,285,814 | + | C1H2g14839 | CX2g019799 | LOC_Os02g54140 | Os02g0782500 | - | Detail |
| C2H2g29708 | 2:30,294,800-30,302,774 | + | C1H2g22644 | CX2g022718 | LOC_Os02g54150 | Os02g0782600 | - | Detail |
| C2H2g28827 | 2:30,303,968-30,306,832 | - | C1H2g28476 | CX2g024767 | LOC_Os02g54160 | Os02g0782700 | - | Detail |
| C2H2g11197 | 2:30,312,822-30,314,933 | + | C1H2g05909 | CX2g024082 | LOC_Os02g54290 | Os02g0782800 | DES4 | Detail |
| C2H2g07779 | 2:30,320,493-30,323,243 | + | C1H2g01675 | CX2g024082 | LOC_Os02g54280 | Os02g0784100 | - | Detail |
| C2H2g14301 | 2:30,324,080-30,324,753 | + | C1H2g27647 | CX2g024797 | LOC_Os02g54180 | Os02g0782900 | - | Detail |
| C2H2g06014 | 2:30,325,061-30,327,476 | - | C1H2g29232 | CX2g021961 | LOC_Os02g54190 | Os02g0783000 | - | Detail |
| C2H2g04597 | 2:30,328,210-30,331,336 | - | C1H2g04161 | CX2g023276 | LOC_Os02g54200 | Os02g0783100 | - | Detail |
| C2H2g29612 | 2:30,338,093-30,350,232 | + | C1H2g13030 | CX2g023139 | LOC_Os02g54254 | Os02g0783700 | OsLKR/SDH | Detail |
| C2H2g20152 | 2:30,352,015-30,353,237 | - | C1H2g18049 | CX2g023165 | - | Os02g0299200 | - | Detail |
| C2H2g09783 | 2:30,354,027-30,358,137 | - | C1H2g23112 | CX2g021182 | LOC_Os02g54340 | Os02g0784700 | OsRpt1b | Detail |
| C2H2g10153 | 2:30,360,807-30,361,283 | - | C1H2g28654 | CX2g021993 | LOC_Os02g54360 | Os02g0784900 | - | Detail |
| C2H2g12061 | 2:30,367,139-30,368,125 | - | - | CX2g020982 | LOC_Os02g54370 | Os02g0785000 | - | Detail |
| C2H2g12917 | 2:30,371,850-30,372,776 | - | - | CX2g023412 | LOC_Os02g54390 | Os02g0785200 | - | Detail |
| C2H2g03301 | 2:30,376,031-30,376,960 | - | - | CX2g021341 | LOC_Os02g54420 | Os02g0785200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025162 | 3:29,653,593-29,653,856 | + | - | - | LOC_Os03g55720 | Os03g0765900 | - | Detail |
| CX3g026492 | 3:29,654,505-29,660,304 | - | C1H3g27991 | C2H3g07544 | LOC_Os03g55730 | Os03g0766000 | - | Detail |
| CX3g029380 | 3:29,663,452-29,663,604 | + | - | - | - | - | - | Detail |
| CX3g026186 | 3:29,671,562-29,677,402 | + | C1H3g28511 | C2H3g01139 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| CX3g025741 | 3:29,678,267-29,678,512 | + | - | - | LOC_Os03g55770 | Os03g0766600 | - | Detail |
| CX3g030741 | 3:29,680,207-29,680,443 | + | C1H3g11551 | - | LOC_Os03g55776 | Os03g0766800 | - | Detail |
| CX3g026597 | 3:29,681,320-29,683,513 | + | C1H3g11551 | C2H3g02791 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| CX3g025516 | 3:29,685,842-29,686,012 | - | - | - | - | - | - | Detail |
| CX3g026072 | 3:29,687,223-29,688,761 | - | C1H3g31142 | C2H3g16646 | LOC_Os03g55800 | Os03g0767000 | AOS1, OsAOS, OsAOS1, CYP74A1 | Detail |
| CX3g029042 | 3:29,692,478-29,692,651 | + | - | - | - | - | - | Detail |
| CX3g026749 | 3:29,695,466-29,698,194 | - | C1H3g16165 | C2H3g02036 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| CX3g027804 | 3:29,702,948-29,706,078 | + | C1H3g10730 | C2H3g25481 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| CX3g030413 | 3:29,706,397-29,707,287 | - | C1H3g13212 | C2H3g17418 | LOC_Os03g55840 | Os03g0767700 | - | Detail |
| CX3g028593 | 3:29,708,966-29,710,984 | + | C1H3g31861 | C2H3g21501 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| CX3g024946 | 3:29,712,225-29,713,105 | + | C1H3g14127 | C2H3g01498 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| CX3g029897 | 3:29,719,833-29,720,255 | + | - | - | LOC_Os03g55880 | Os03g0768900 | - | Detail |
| CX3g028693 | 3:29,721,276-29,724,849 | - | C1H3g26336 | C2H3g08266 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| CX3g027389 | 3:29,732,912-29,737,328 | - | C1H3g24628 | C2H3g19989 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| CX3g028168 | 3:29,738,326-29,739,831 | - | C1H3g25789 | C2H3g27533 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| CX3g028504 | 3:29,748,792-29,751,161 | + | C1H3g19145 | C2H3g12948 | LOC_Os03g55950 | Os03g0769400 | - | Detail |