| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g21544 | 1:3,271,220-3,273,056 | + | C1H1g19012 | CX1g005114 | LOC_Os01g07770 | Os01g0172600 | - | Detail |
| C2H1g20728 | 1:3,275,547-3,276,119 | + | C1H1g10453 | CX1g002646 | LOC_Os01g07780 | Os01g0172800 | - | Detail |
| C2H1g22521 | 1:3,277,256-3,280,184 | + | C1H1g07102 | CX1g000708 | LOC_Os01g07790 | Os01g0172900 | - | Detail |
| C2H1g05856 | 1:3,280,342-3,281,598 | - | C1H1g22748 | CX1g005561 | LOC_Os01g07800 | Os01g0173000 | - | Detail |
| C2H1g12136 | 1:3,282,512-3,284,748 | - | C1H1g06548 | CX1g002508 | LOC_Os01g07810 | Os01g0173100 | - | Detail |
| C2H1g26590 | 1:3,292,936-3,294,694 | + | C1H1g18797 | CX1g005870 | LOC_Os01g07850 | Os01g0173600 | - | Detail |
| C2H1g11564 | 1:3,312,184-3,317,894 | + | C1H1g19078 | CX1g003910 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| C2H1g09395 | 1:3,318,906-3,319,741 | - | C1H1g28967 | CX1g004606 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| C2H1g09850 | 1:3,325,028-3,328,400 | - | C1H1g04301 | CX1g005118 | LOC_Os01g07890 | Os01g0174100 | - | Detail |
| C2H1g12786 | 1:3,329,854-3,334,170 | - | C1H1g06431 | CX1g006673 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| C2H1g18737 | 1:3,336,797-3,339,694 | - | C1H1g24697 | CX1g002809 | LOC_Os01g07920 | Os01g0174500 | - | Detail |
| C2H1g10965 | 1:3,340,091-3,340,516 | - | C1H1g15491 | CX1g002809 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| C2H1g16794 | 1:3,340,560-3,341,084 | - | C1H1g15491 | CX1g002809 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| C2H1g29949 | 1:3,345,032-3,352,288 | - | C1H1g13210 | CX1g001687 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| C2H1g27987 | 1:3,351,947-3,355,151 | + | C1H1g13045 | CX1g001175 | LOC_Os01g07950 | Os01g0174900 | - | Detail |
| C2H1g22647 | 1:3,355,740-3,359,728 | - | C1H1g24398 | CX1g003986 | LOC_Os01g07960 | Os01g0175000 | - | Detail |
| C2H1g20408 | 1:3,363,911-3,364,207 | + | C1H1g17122 | CX1g001645 | - | Os01g0919400 | SPS1, sps1, OsSPS1, SPS | Detail |
| C2H1g24660 | 1:3,367,575-3,367,985 | - | - | CX1g000025 | LOC_Os01g07970 | Os01g0175100 | - | Detail |
| C2H1g30617 | 1:3,370,609-3,377,455 | - | C1H1g18087 | CX1g004096 | LOC_Os01g08000 | Os01g0188900 | - | Detail |
| C2H1g07461 | 1:3,379,120-3,380,550 | + | - | CX1g000676 | LOC_Os01g08010 | Os01g0175500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025162 | 3:29,653,593-29,653,856 | + | - | - | LOC_Os03g55720 | Os03g0765900 | - | Detail |
| CX3g026492 | 3:29,654,505-29,660,304 | - | C1H3g27991 | C2H3g07544 | LOC_Os03g55730 | Os03g0766000 | - | Detail |
| CX3g029380 | 3:29,663,452-29,663,604 | + | - | - | - | - | - | Detail |
| CX3g026186 | 3:29,671,562-29,677,402 | + | C1H3g28511 | C2H3g01139 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| CX3g025741 | 3:29,678,267-29,678,512 | + | - | - | LOC_Os03g55770 | Os03g0766600 | - | Detail |
| CX3g030741 | 3:29,680,207-29,680,443 | + | C1H3g11551 | - | LOC_Os03g55776 | Os03g0766800 | - | Detail |
| CX3g026597 | 3:29,681,320-29,683,513 | + | C1H3g11551 | C2H3g02791 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| CX3g025516 | 3:29,685,842-29,686,012 | - | - | - | - | - | - | Detail |
| CX3g026072 | 3:29,687,223-29,688,761 | - | C1H3g31142 | C2H3g16646 | LOC_Os03g55800 | Os03g0767000 | AOS1, OsAOS, OsAOS1, CYP74A1 | Detail |
| CX3g029042 | 3:29,692,478-29,692,651 | + | - | - | - | - | - | Detail |
| CX3g026749 | 3:29,695,466-29,698,194 | - | C1H3g16165 | C2H3g02036 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| CX3g027804 | 3:29,702,948-29,706,078 | + | C1H3g10730 | C2H3g25481 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| CX3g030413 | 3:29,706,397-29,707,287 | - | C1H3g13212 | C2H3g17418 | LOC_Os03g55840 | Os03g0767700 | - | Detail |
| CX3g028593 | 3:29,708,966-29,710,984 | + | C1H3g31861 | C2H3g21501 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| CX3g024946 | 3:29,712,225-29,713,105 | + | C1H3g14127 | C2H3g01498 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| CX3g029897 | 3:29,719,833-29,720,255 | + | - | - | LOC_Os03g55880 | Os03g0768900 | - | Detail |
| CX3g028693 | 3:29,721,276-29,724,849 | - | C1H3g26336 | C2H3g08266 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| CX3g027389 | 3:29,732,912-29,737,328 | - | C1H3g24628 | C2H3g19989 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| CX3g028168 | 3:29,738,326-29,739,831 | - | C1H3g25789 | C2H3g27533 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| CX3g028504 | 3:29,748,792-29,751,161 | + | C1H3g19145 | C2H3g12948 | LOC_Os03g55950 | Os03g0769400 | - | Detail |