| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g06003 | 6:5,343,550-5,348,718 | - | C2H6g07096 | CX6g044450 | LOC_Os06g11730 | Os06g0220600 | - | Detail |
| C1H6g12090 | 6:5,357,141-5,358,844 | + | C2H6g12923 | CX6g041505 | LOC_Os06g11740 | Os06g0220800 | - | Detail |
| C1H6g18231 | 6:5,373,442-5,374,565 | + | C2H6g06859 | CX6g044637 | LOC_Os06g11780 | Os06g0221000 | Os2R_MYB64 | Detail |
| C1H6g12182 | 6:5,377,314-5,377,874 | - | C2H6g09044 | CX6g043968 | LOC_Os06g05970 | Os06g0125200 | OsFLZ18 | Detail |
| C1H6g30010 | 6:5,378,805-5,382,380 | - | C2H6g11727 | CX6g043620 | LOC_Os06g11790 | Os06g0221100 | - | Detail |
| C1H6g19489 | 6:5,384,826-5,387,784 | + | C2H6g09527 | CX6g041413 | LOC_Os06g11800 | Os06g0221200 | OsAnn5 | Detail |
| C1H6g08428 | 6:5,399,442-5,401,644 | - | C2H6g07173 | CX6g045872 | LOC_Os06g11840 | Os06g0222100 | - | Detail |
| C1H6g29059 | 6:5,470,802-5,471,614 | + | C2H6g19517 | CX6g043510 | LOC_Os06g13700 | - | - | Detail |
| C1H6g03240 | 6:5,472,330-5,473,090 | - | C2H6g06546 | CX4g035540 | LOC_Os06g13690 | - | - | Detail |
| C1H6g27313 | 6:5,484,099-5,486,111 | + | C2H6g21982 | CX6g043930 | - | Os06g0278000 | - | Detail |
| C1H6g29282 | 6:5,489,650-5,493,285 | - | C2H6g15738 | CX6g044400 | LOC_Os06g11910 | Os06g0222800 | - | Detail |
| C1H6g05758 | 6:5,494,624-5,495,339 | - | C2H6g10459 | CX6g043189 | LOC_Os06g11920 | Os06g0222900 | - | Detail |
| C1H6g02178 | 6:5,495,761-5,497,808 | - | C2H6g24071 | CX6g043189 | LOC_Os06g11920 | Os06g0222900 | - | Detail |
| C1H6g19373 | 6:5,516,954-5,520,344 | - | C2H6g18727 | CX6g043681 | LOC_Os06g11960 | Os06g0223200 | - | Detail |
| C1H6g01570 | 6:5,520,562-5,524,225 | + | C2H6g28885 | CX6g043809 | LOC_Os06g11970 | Os06g0223300 | MADS63, OsMADS63 | Detail |
| C1H6g15343 | 6:5,542,700-5,544,161 | - | C2H6g01453 | CX6g043571 | LOC_Os06g11980 | Os06g0223700 | OsFLZ20 | Detail |
| C1H6g09653 | 6:5,550,670-5,561,673 | - | C2H6g13530 | CX6g041262 | LOC_Os06g11990 | Os06g0223800 | - | Detail |
| C1H6g07359 | 6:5,568,270-5,569,865 | + | C2H4g00844 | - | - | - | - | Detail |
| C1H6g28678 | 6:5,577,750-5,578,575 | - | - | CX6g044185 | - | - | - | Detail |
| C1H6g19428 | 6:5,586,683-5,591,494 | + | C2H6g06279 | CX6g043936 | LOC_Os06g12020 | Os06g0224100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025162 | 3:29,653,593-29,653,856 | + | - | - | LOC_Os03g55720 | Os03g0765900 | - | Detail |
| CX3g026492 | 3:29,654,505-29,660,304 | - | C1H3g27991 | C2H3g07544 | LOC_Os03g55730 | Os03g0766000 | - | Detail |
| CX3g029380 | 3:29,663,452-29,663,604 | + | - | - | - | - | - | Detail |
| CX3g026186 | 3:29,671,562-29,677,402 | + | C1H3g28511 | C2H3g01139 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| CX3g025741 | 3:29,678,267-29,678,512 | + | - | - | LOC_Os03g55770 | Os03g0766600 | - | Detail |
| CX3g030741 | 3:29,680,207-29,680,443 | + | C1H3g11551 | - | LOC_Os03g55776 | Os03g0766800 | - | Detail |
| CX3g026597 | 3:29,681,320-29,683,513 | + | C1H3g11551 | C2H3g02791 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| CX3g025516 | 3:29,685,842-29,686,012 | - | - | - | - | - | - | Detail |
| CX3g026072 | 3:29,687,223-29,688,761 | - | C1H3g31142 | C2H3g16646 | LOC_Os03g55800 | Os03g0767000 | AOS1, OsAOS, OsAOS1, CYP74A1 | Detail |
| CX3g029042 | 3:29,692,478-29,692,651 | + | - | - | - | - | - | Detail |
| CX3g026749 | 3:29,695,466-29,698,194 | - | C1H3g16165 | C2H3g02036 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| CX3g027804 | 3:29,702,948-29,706,078 | + | C1H3g10730 | C2H3g25481 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| CX3g030413 | 3:29,706,397-29,707,287 | - | C1H3g13212 | C2H3g17418 | LOC_Os03g55840 | Os03g0767700 | - | Detail |
| CX3g028593 | 3:29,708,966-29,710,984 | + | C1H3g31861 | C2H3g21501 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| CX3g024946 | 3:29,712,225-29,713,105 | + | C1H3g14127 | C2H3g01498 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| CX3g029897 | 3:29,719,833-29,720,255 | + | - | - | LOC_Os03g55880 | Os03g0768900 | - | Detail |
| CX3g028693 | 3:29,721,276-29,724,849 | - | C1H3g26336 | C2H3g08266 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| CX3g027389 | 3:29,732,912-29,737,328 | - | C1H3g24628 | C2H3g19989 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| CX3g028168 | 3:29,738,326-29,739,831 | - | C1H3g25789 | C2H3g27533 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| CX3g028504 | 3:29,748,792-29,751,161 | + | C1H3g19145 | C2H3g12948 | LOC_Os03g55950 | Os03g0769400 | - | Detail |