| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09834 | 1:9,111,388-9,111,723 | + | C2H1g08442 | - | - | - | - | Detail |
| C1H1g31050 | 1:9,113,543-9,122,637 | + | C2H1g22354 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C1H1g09627 | 1:9,124,603-9,125,372 | - | C2H1g13905 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C1H1g10680 | 1:9,132,796-9,135,738 | + | C2H1g17254 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C1H1g13588 | 1:9,141,749-9,142,612 | - | C2H1g07308 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C1H1g17641 | 1:9,154,576-9,155,375 | - | C2H1g20440 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C1H1g06479 | 1:9,163,852-9,166,083 | - | C2H1g10789 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C1H1g05697 | 1:9,211,047-9,214,437 | + | C2H1g03219 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C1H1g18723 | 1:9,219,612-9,223,119 | - | C2H1g23388 | CX1g006989 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g02909 | 1:9,238,369-9,239,842 | - | C2H1g25947 | CX1g001405 | LOC_Os11g02650 | - | - | Detail |
| C1H1g25972 | 1:9,241,032-9,242,334 | - | C2H1g12260 | - | LOC_Os01g13050 | Os01g0861400 | - | Detail |
| C1H1g02936 | 1:9,244,036-9,247,610 | + | C2H1g13264 | CX1g004036 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| C1H1g02001 | 1:9,260,143-9,263,439 | + | C2H1g18493 | CX1g000296 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| C1H1g26094 | 1:9,285,715-9,286,050 | + | C2H1g16973 | CX1g002314 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| C1H1g20358 | 1:9,288,357-9,288,734 | - | C2H1g04657 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g26001 | 1:9,289,217-9,289,708 | - | C2H1g10428 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g01375 | 1:9,324,450-9,324,810 | - | C2H1g21581 | CX1g005603 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| C1H1g15975 | 1:9,340,737-9,341,039 | - | C2H1g03324 | - | LOC_Os01g18490 | Os01g0288800 | - | Detail |
| C1H1g27658 | 1:9,376,678-9,383,015 | + | C2H1g00434 | CX1g004171 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| C1H1g31040 | 1:9,410,229-9,411,702 | - | C2H1g15794 | CX1g002453 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028267 | 3:29,489,224-29,490,435 | - | C1H3g30412 | C2H3g21236 | LOC_Os03g55450 | Os03g0762700 | - | Detail |
| CX3g027974 | 3:29,500,680-29,505,525 | + | C1H3g31602 | C2H3g28904 | LOC_Os03g55470 | Os03g0762900 | - | Detail |
| CX3g028419 | 3:29,508,613-29,512,741 | + | C1H3g12054 | C2H3g20218 | LOC_Os03g55490 | Os03g0763000 | - | Detail |
| CX3g031145 | 3:29,516,415-29,516,591 | + | - | - | - | - | - | Detail |
| CX3g027285 | 3:29,536,545-29,538,167 | + | C1H3g10528 | C2H3g15832 | LOC_Os03g55530 | Os03g0764000 | GSE3 | Detail |
| CX3g026397 | 3:29,544,178-29,544,780 | - | C1H3g07955 | C2H3g05642 | LOC_Os03g55540 | Os03g0764100 | OsADR3 | Detail |
| CX3g027062 | 3:29,551,762-29,558,234 | - | C1H3g07992 | C2H3g26472 | LOC_Os03g55560 | Os03g0764300 | OstMAPKKK5 | Detail |
| CX3g031219 | 3:29,556,907-29,558,328 | + | C1H3g05042 | - | - | Os03g0764250 | - | Detail |
| CX3g030515 | 3:29,561,879-29,562,163 | + | - | - | - | - | - | Detail |
| CX3g027539 | 3:29,564,885-29,571,218 | + | C1H3g08783 | C2H3g25717 | LOC_Os03g55570 | Os03g0764450 | - | Detail |
| CX3g029766 | 3:29,580,943-29,582,784 | + | C1H3g17565 | C2H3g13812 | LOC_Os03g55590 | Os03g0764600 | OsHHO3 | Detail |
| CX3g030582 | 3:29,588,232-29,593,281 | + | C1H3g10682 | C2H3g16680 | LOC_Os03g55600 | Os03g0764800 | SAPK8, OsSAPK8 | Detail |
| CX3g028587 | 3:29,598,176-29,598,742 | - | - | - | LOC_Os03g55610 | Os03g0764900 | OsDOF15, SP3 | Detail |
| CX3g027424 | 3:29,610,304-29,612,946 | + | C1H3g29826 | C2H3g01981 | LOC_Os03g55620 | Os03g0765000 | - | Detail |
| CX3g029687 | 3:29,614,643-29,617,143 | + | C1H3g07713 | C2H3g10671 | LOC_Os03g55630 | Os03g0765100 | - | Detail |
| CX3g025964 | 3:29,618,164-29,620,283 | - | C1H3g24709 | C2H3g01497 | LOC_Os03g55640 | Os03g0765200 | - | Detail |
| CX3g030762 | 3:29,627,806-29,630,935 | - | C1H3g19260 | C2H3g05267 | LOC_Os03g55660 | Os03g0765400 | - | Detail |
| CX3g030135 | 3:29,631,671-29,633,371 | - | C1H3g01103 | C2H3g21899 | LOC_Os03g55670 | Os03g0765500 | - | Detail |
| CX3g030205 | 3:29,634,839-29,635,852 | - | C1H3g25450 | C2H3g20680 | LOC_Os03g55680 | Os03g0765500 | - | Detail |
| CX3g030557 | 3:29,647,594-29,650,404 | + | - | - | LOC_Os03g55704 | Os03g0765800 | - | Detail |