| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g28763 | 12:2,412,697-2,419,666 | - | C2H12g08928 | CX12g016609 | LOC_Os12g05680 | Os12g0152900 | OsbZIP83, TGAL11 | Detail |
| C1H12g29526 | 12:2,454,270-2,455,192 | + | C2H12g05776 | CX12g016099 | LOC_Os12g05730 | Os12g0153500 | - | Detail |
| C1H12g08598 | 12:2,458,129-2,460,493 | + | C2H12g00041 | CX12g015296 | LOC_Os12g05740 | Os12g0153600 | - | Detail |
| C1H12g02157 | 12:2,474,806-2,478,479 | - | C2H12g09749 | CX12g017479 | LOC_Os12g05780 | Os12g0154600 | - | Detail |
| C1H12g30827 | 12:2,481,908-2,484,588 | + | C2H12g04677 | CX12g017672 | LOC_Os12g05810 | Os12g0154400 | - | Detail |
| C1H12g29174 | 12:2,486,447-2,489,740 | + | C2H12g18141 | CX12g018561 | LOC_Os12g05830 | Os12g0154600 | - | Detail |
| C1H12g23452 | 12:2,490,862-2,491,670 | - | C2H12g12501 | CX12g018459 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C1H12g24006 | 12:2,494,531-2,495,340 | - | C2H12g27455 | CX12g017127 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C1H12g18669 | 12:2,498,282-2,499,089 | - | C2H12g23733 | CX12g015507 | LOC_Os12g05870 | Os12g0154900 | GLP12-3, GLP12-1, OsGLP12-3 | Detail |
| C1H12g28017 | 12:2,501,315-2,502,115 | - | C2H12g06783 | CX12g017127 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C1H12g20880 | 12:2,508,879-2,509,706 | - | C2H12g30495 | - | LOC_Os12g05890 | Os12g0155100 | - | Detail |
| C1H12g14419 | 12:2,511,721-2,517,180 | - | C2H12g28920 | CX12g015199 | LOC_Os12g05900 | Os12g0155200 | - | Detail |
| C1H12g09556 | 12:2,526,787-2,533,353 | + | C2H12g08033 | CX12g016405 | LOC_Os12g05920 | Os12g0155300 | - | Detail |
| C1H12g13408 | 12:2,561,807-2,564,747 | + | C2H12g30008 | - | - | - | - | Detail |
| C1H12g25513 | 12:2,566,483-2,566,977 | + | C2H12g25535 | - | LOC_Os12g05980 | Os12g0156000 | OsS40-11 | Detail |
| C1H12g22379 | 12:2,580,891-2,581,972 | + | C2H12g21191 | CX12g018344 | LOC_Os12g06010 | - | - | Detail |
| C1H12g25878 | 12:2,588,270-2,591,678 | + | C2H12g11114 | CX12g018607 | LOC_Os12g06020 | Os12g0156400 | OsDCP1 | Detail |
| C1H12g25918 | 12:2,593,212-2,593,784 | - | C2H12g15516 | CX12g016643 | LOC_Os12g06030 | Os12g0156500 | - | Detail |
| C1H12g17917 | 12:2,596,635-2,596,913 | - | C2H12g19712 | CX12g016643 | LOC_Os12g06030 | Os12g0156500 | - | Detail |
| C1H12g29220 | 12:2,619,863-2,626,404 | + | C2H12g03761 | CX12g017632 | LOC_Os12g06060 | Os12g0156866 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006523 | 1:17,562,011-17,565,264 | + | C1H1g21896 | C2H1g11782 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| CX1g006417 | 1:17,563,072-17,563,344 | - | - | - | - | Os01g0523250 | - | Detail |
| CX1g006433 | 1:17,564,332-17,564,562 | - | - | - | - | - | - | Detail |
| CX1g005107 | 1:17,572,904-17,580,360 | + | C1H1g09014 | C2H1g13197 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| CX1g001056 | 1:17,578,572-17,579,060 | - | - | - | - | Os01g0524251 | - | Detail |
| CX1g001351 | 1:17,593,672-17,593,854 | + | - | - | LOC_Os01g31140 | - | - | Detail |
| CX1g006002 | 1:17,594,332-17,594,520 | - | - | - | - | - | - | Detail |
| CX1g004873 | 1:17,603,645-17,603,974 | + | - | - | LOC_Os01g34050 | Os01g0524400 | - | Detail |
| CX1g000293 | 1:17,609,165-17,610,348 | + | C1H1g03031 | C2H1g22021 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| CX1g003083 | 1:17,624,276-17,633,153 | + | C1H1g05337 | C2H1g01344 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| CX1g002221 | 1:17,637,998-17,638,498 | - | - | - | LOC_Os01g34110 | - | - | Detail |
| CX1g003436 | 1:17,643,330-17,643,686 | + | - | - | - | - | - | Detail |
| CX1g002958 | 1:17,644,707-17,645,390 | + | - | - | LOC_Os01g34110 | - | - | Detail |
| CX1g007014 | 1:17,661,384-17,661,737 | - | - | - | - | - | - | Detail |
| CX1g002305 | 1:17,663,326-17,663,826 | - | - | - | - | - | - | Detail |
| CX1g003207 | 1:17,687,385-17,687,555 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002923 | 1:17,706,509-17,709,254 | + | C1H1g01010 | C2H1g17057 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| CX1g003716 | 1:17,710,469-17,713,760 | + | C1H1g10979 | C2H1g19688 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| CX1g004051 | 1:17,733,961-17,734,641 | - | - | - | - | - | - | Detail |
| CX1g004593 | 1:17,742,522-17,742,920 | + | - | - | LOC_Os01g34320 | - | - | Detail |