| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g00265 | 11:16,017,977-16,018,242 | + | C1H11g04694 | - | - | - | - | Detail |
| C2H11g03682 | 11:16,019,282-16,020,371 | + | C1H11g22326 | CX11g013108 | LOC_Os11g30910 | Os11g0505300 | STV11, OsSOT1 | Detail |
| C2H11g12950 | 11:16,055,498-16,056,635 | - | C1H11g18981 | CX11g012904 | - | - | - | Detail |
| C2H11g07707 | 11:16,058,802-16,062,787 | - | C1H11g04733 | CX11g013034 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| C2H11g24452 | 11:16,083,324-16,085,813 | - | C1H11g01433 | CX11g011882 | - | - | - | Detail |
| C2H11g19133 | 11:16,101,966-16,104,538 | + | C1H11g28049 | CX11g014596 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| C2H11g00051 | 11:16,106,403-16,112,480 | - | C1H11g02002 | CX11g011414 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| C2H11g25408 | 11:16,116,383-16,122,093 | - | C1H11g16532 | CX11g014983 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| C2H11g13604 | 11:16,175,027-16,183,838 | + | C1H11g15164 | CX11g012879 | - | - | - | Detail |
| C2H11g14886 | 11:16,212,809-16,215,231 | - | C1H11g17370 | CX11g014845 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| C2H11g10237 | 11:16,225,735-16,229,982 | - | C1H11g16566 | - | - | - | - | Detail |
| C2H11g01178 | 11:16,265,929-16,267,830 | + | C1H11g06724 | CX11g013912 | LOC_Os11g31330 | Os11g0512000 | ONAC025, SS1, SS1/ ONAC025 | Detail |
| C2H11g11640 | 11:16,271,802-16,273,910 | + | C1H11g14895 | CX11g013912 | LOC_Os11g31340 | Os11g0512100 | ONAC127 | Detail |
| C2H11g24382 | 11:16,278,637-16,280,896 | + | C1H11g00143 | CX11g012563 | LOC_Os11g31360 | Os11g0512200 | - | Detail |
| C2H11g26741 | 11:16,289,112-16,291,043 | + | C1H11g30952 | CX11g012563 | LOC_Os11g31380 | Os11g0512600 | ONAC129 | Detail |
| C2H11g02622 | 11:16,298,647-16,298,982 | + | C1H11g16256 | CX11g011889 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| C2H11g28267 | 11:16,341,430-16,350,415 | - | C1H11g13788 | - | LOC_Os11g31480 | Os11g0514000 | stvb-j, Stvb-i, ST07i | Detail |
| C2H11g17850 | 11:16,353,764-16,355,586 | - | C1H11g31406 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g12230 | 11:16,373,799-16,375,853 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g06164 | 11:16,376,216-16,378,142 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025233 | 3:29,250,359-29,250,556 | - | - | - | - | - | - | Detail |
| CX3g031235 | 3:29,258,507-29,259,949 | + | C1H3g18474 | C2H3g15309 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| CX3g024997 | 3:29,265,491-29,267,086 | - | C1H3g02197 | C2H3g28463 | LOC_Os03g55080 | Os03g0758000 | - | Detail |
| CX3g026009 | 3:29,268,143-29,268,469 | - | C1H3g02197 | C2H3g28463 | LOC_Os03g55080 | Os03g0758050 | - | Detail |
| CX3g028301 | 3:29,273,847-29,280,625 | - | C1H3g12323 | C2H3g07139 | LOC_Os03g55090 | Os03g0758100 | OsPho1 | Detail |
| CX3g028780 | 3:29,283,754-29,288,819 | + | C1H3g03734 | C2H3g19977 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| CX3g029041 | 3:29,291,206-29,291,364 | - | - | C2H3g12332 | - | - | - | Detail |
| CX3g028495 | 3:29,299,632-29,299,790 | + | - | C2H3g12332 | - | - | - | Detail |
| CX3g025340 | 3:29,302,065-29,304,916 | + | C1H3g12190 | C2H3g18083 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| CX3g025542 | 3:29,307,191-29,307,828 | - | C1H3g12511 | C2H3g16234 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| CX3g030315 | 3:29,323,056-29,328,769 | + | C1H3g28552 | C2H3g10389 | LOC_Os03g55130 | Os03g0758551 | - | Detail |
| CX3g029765 | 3:29,329,905-29,333,521 | + | C1H3g29486 | C2H3g16550 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| CX3g027861 | 3:29,336,407-29,338,418 | + | C1H3g11985 | C2H3g15196 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| CX3g030192 | 3:29,339,372-29,341,601 | + | C1H3g25907 | C2H3g06066 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| CX3g030258 | 3:29,343,616-29,347,058 | + | C1H3g14505 | C2H3g20753 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| CX3g028552 | 3:29,347,775-29,350,187 | - | C1H3g16488 | C2H3g12552 | LOC_Os03g55180 | Os03g0759000 | - | Detail |
| CX3g026932 | 3:29,357,456-29,359,384 | + | C1H3g23489 | C2H3g13001 | LOC_Os03g55200 | Os03g0759500 | OsORC5 | Detail |
| CX3g027531 | 3:29,360,954-29,363,473 | - | C1H3g05953 | C2H3g23238 | LOC_Os03g55210 | Os03g0759600 | - | Detail |
| CX3g030027 | 3:29,370,065-29,374,504 | + | C1H3g02617 | C2H3g21370 | LOC_Os03g55220 | Os03g0759700 | - | Detail |
| CX3g027892 | 3:29,381,354-29,384,699 | + | C1H3g22708 | C2H3g27540 | LOC_Os03g55240 | Os03g0760200 | Bel, CYP81A6 | Detail |