| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g04990 | 4:17,699,171-17,700,298 | + | - | - | - | - | - | Detail |
| C2H4g24330 | 4:17,711,489-17,712,113 | + | C1H4g30119 | - | - | - | - | Detail |
| C2H4g08150 | 4:17,724,269-17,726,692 | + | C1H4g03311 | CX4g033680 | LOC_Os04g34250 | Os04g0419700 | SDRLK-51 | Detail |
| C2H4g26271 | 4:17,735,187-17,737,637 | + | C1H4g04575 | CX4g033680 | LOC_Os04g34290 | Os04g0420033 | SDRLK-26 | Detail |
| C2H4g13042 | 4:17,745,580-17,748,033 | + | C1H4g01062 | CX4g033680 | LOC_Os04g34300 | Os04g0420300 | - | Detail |
| C2H4g16865 | 4:17,752,564-17,755,246 | + | C1H4g21702 | CX4g033812 | LOC_Os04g34290 | Os04g0420033 | SDRLK-26 | Detail |
| C2H4g16575 | 4:17,763,468-17,767,284 | - | C1H4g31317 | CX4g033421 | - | Os04g0420500 | - | Detail |
| C2H4g05707 | 4:17,763,493-17,765,889 | + | C1H4g15228 | CX4g033680 | LOC_Os04g34330 | Os04g0420600 | SDRLK-27 | Detail |
| C2H4g18021 | 4:17,780,447-17,782,867 | + | C1H4g17134 | CX4g033680 | LOC_Os04g34370 | Os04g0420900 | SDRLK-28 | Detail |
| C2H4g06952 | 4:17,787,911-17,790,319 | + | C1H4g06037 | CX4g033680 | LOC_Os04g34390 | Os04g0225250 | - | Detail |
| C2H4g03046 | 4:17,793,586-17,796,012 | + | C1H4g25956 | CX4g033680 | LOC_Os04g34420 | Os04g0420900 | SDRLK-28 | Detail |
| C2H4g23175 | 4:17,798,162-17,801,821 | - | C1H4g21817 | CX4g032456 | LOC_Os04g30870 | Os04g0421700 | - | Detail |
| C2H4g26985 | 4:17,802,924-17,808,772 | - | C1H4g07421 | CX4g033351 | LOC_Os04g34440 | Os04g0421800 | - | Detail |
| C2H4g06424 | 4:17,813,614-17,822,960 | + | C1H4g28729 | CX4g033137 | LOC_Os04g34450 | Os04g0421900 | - | Detail |
| C2H4g13085 | 4:17,827,198-17,829,398 | + | C1H4g07371 | CX4g035201 | LOC_Os04g34460 | Os04g0422000 | - | Detail |
| C2H4g17131 | 4:17,831,029-17,831,291 | - | C1H4g20919 | CX4g033312 | LOC_Os04g34480 | Os04g0422200 | - | Detail |
| C2H4g13723 | 4:17,831,414-17,831,632 | - | C1H4g19536 | CX4g033312 | LOC_Os04g34480 | Os04g0422200 | - | Detail |
| C2H4g24066 | 4:17,833,409-17,835,575 | - | C1H4g08631 | CX4g032627 | LOC_Os04g34490 | Os04g0422300 | - | Detail |
| C2H4g10014 | 4:17,854,066-17,859,277 | + | C1H4g21835 | CX4g034213 | LOC_Os04g34530 | Os04g0422600 | - | Detail |
| C2H4g15959 | 4:17,859,769-17,860,757 | - | C1H4g15469 | - | LOC_Os04g34540 | Os04g0422700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031002 | 3:29,089,446-29,095,556 | - | C1H3g02242 | C2H3g26951 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| CX3g030268 | 3:29,105,338-29,106,717 | - | C1H3g31832 | C2H3g17415 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| CX3g026043 | 3:29,112,421-29,113,551 | + | C1H3g27471 | C2H3g04287 | - | - | - | Detail |
| CX3g027702 | 3:29,115,431-29,118,414 | - | C1H3g27092 | C2H3g04194 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| CX3g025245 | 3:29,119,820-29,119,981 | - | - | - | - | - | - | Detail |
| CX3g030330 | 3:29,122,434-29,125,176 | + | C1H3g31483 | C2H3g28760 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| CX3g025057 | 3:29,126,821-29,127,459 | - | - | - | - | - | - | Detail |
| CX3g030692 | 3:29,127,979-29,132,969 | + | C1H3g01206 | C2H3g21643 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| CX3g030684 | 3:29,133,597-29,142,065 | + | C1H3g11086 | C2H3g21643 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| CX3g030008 | 3:29,143,611-29,148,496 | + | C1H3g02500 | C2H3g18088 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| CX3g026242 | 3:29,152,056-29,154,456 | + | C1H3g16167 | C2H3g29659 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| CX3g029420 | 3:29,172,457-29,175,603 | - | C1H3g18285 | C2H3g18957 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| CX3g031296 | 3:29,180,248-29,182,214 | - | C1H3g24157 | C2H3g16088 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| CX3g026830 | 3:29,184,606-29,187,485 | - | C1H3g08569 | C2H3g07304 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| CX3g027104 | 3:29,188,900-29,195,232 | - | C1H3g25183 | C2H3g22264 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| CX3g026117 | 3:29,199,483-29,199,662 | + | - | - | - | - | - | Detail |
| CX3g027732 | 3:29,200,388-29,205,275 | - | C1H3g07989 | C2H3g18479 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| CX3g030336 | 3:29,205,581-29,206,154 | + | C1H3g04866 | C2H3g11581 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| CX3g030173 | 3:29,244,636-29,244,905 | - | - | - | - | - | - | Detail |
| CX3g027817 | 3:29,246,658-29,247,068 | + | - | - | - | Os03g0757750 | - | Detail |