| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g26632 | 2:26,837,693-26,841,378 | + | C1H2g30729 | CX2g023793 | LOC_Os02g47650 | Os02g0705400 | - | Detail |
| C2H2g29538 | 2:26,841,564-26,843,748 | - | C1H2g05380 | CX2g021493 | LOC_Os02g47660 | Os02g0705500 | - | Detail |
| C2H2g18272 | 2:26,860,238-26,865,949 | - | C1H2g14367 | CX2g023023 | LOC_Os02g47670 | Os02g0705600 | - | Detail |
| C2H2g28571 | 2:26,879,120-26,884,315 | + | C1H2g10828 | CX2g021563 | LOC_Os02g47744 | Os02g0706400 | OsRL3 | Detail |
| C2H2g17664 | 2:26,893,484-26,898,385 | + | C1H2g26087 | CX2g019318 | LOC_Os02g47760 | Os02g0706500 | - | Detail |
| C2H2g26631 | 2:26,901,178-26,902,482 | - | - | CX2g022609 | LOC_Os02g47770 | Os02g0706600 | - | Detail |
| C2H2g15914 | 2:26,917,994-26,918,335 | - | C1H2g30863 | CX2g024154 | LOC_Os02g47780 | Os02g0706900 | - | Detail |
| C2H2g28055 | 2:26,918,527-26,920,005 | - | C1H2g30863 | CX2g024154 | LOC_Os02g47780 | Os02g0706900 | - | Detail |
| C2H2g07024 | 2:26,920,580-26,922,848 | - | C1H2g01005 | CX2g019600 | LOC_Os02g47790 | Os02g0707000 | - | Detail |
| C2H2g30485 | 2:26,923,625-26,927,782 | - | C1H2g01327 | CX2g019600 | LOC_Os02g47800 | Os02g0707100 | - | Detail |
| C2H2g10798 | 2:26,932,818-26,936,453 | - | C1H2g09874 | CX2g019647 | LOC_Os02g47810 | Os02g0707200 | OsDOF11 | Detail |
| C2H2g26136 | 2:26,950,078-26,950,644 | + | - | CX2g020705 | LOC_Os02g47830 | Os02g0708000 | - | Detail |
| C2H2g24339 | 2:26,950,864-26,956,310 | - | C1H2g06757 | CX2g022812 | LOC_Os02g47840 | Os02g0707900 | - | Detail |
| C2H2g26317 | 2:26,961,024-26,965,297 | + | C1H2g30395 | CX2g022631 | LOC_Os02g47850 | Os02g0708100 | - | Detail |
| C2H2g27403 | 2:26,968,491-26,974,714 | + | C1H2g18935 | CX2g022212 | LOC_Os02g47860 | Os02g0708200 | - | Detail |
| C2H2g11560 | 2:26,976,131-26,978,484 | + | C1H2g31246 | CX2g021188 | LOC_Os02g47870 | Os02g0708300 | - | Detail |
| C2H2g06558 | 2:26,978,895-26,983,103 | - | C1H2g01202 | CX2g019740 | LOC_Os02g47880 | Os02g0708400 | - | Detail |
| C2H2g23662 | 2:26,997,267-27,009,859 | + | - | - | - | - | - | Detail |
| C2H2g02283 | 2:27,024,737-27,026,336 | + | C1H2g18977 | CX2g019743 | LOC_Os02g47920 | Os02g0709000 | - | Detail |
| C2H2g07338 | 2:27,026,820-27,028,662 | - | C1H2g24640 | CX2g024449 | LOC_Os02g47930 | Os02g0709100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031002 | 3:29,089,446-29,095,556 | - | C1H3g02242 | C2H3g26951 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| CX3g030268 | 3:29,105,338-29,106,717 | - | C1H3g31832 | C2H3g17415 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| CX3g026043 | 3:29,112,421-29,113,551 | + | C1H3g27471 | C2H3g04287 | - | - | - | Detail |
| CX3g027702 | 3:29,115,431-29,118,414 | - | C1H3g27092 | C2H3g04194 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| CX3g025245 | 3:29,119,820-29,119,981 | - | - | - | - | - | - | Detail |
| CX3g030330 | 3:29,122,434-29,125,176 | + | C1H3g31483 | C2H3g28760 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| CX3g025057 | 3:29,126,821-29,127,459 | - | - | - | - | - | - | Detail |
| CX3g030692 | 3:29,127,979-29,132,969 | + | C1H3g01206 | C2H3g21643 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| CX3g030684 | 3:29,133,597-29,142,065 | + | C1H3g11086 | C2H3g21643 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| CX3g030008 | 3:29,143,611-29,148,496 | + | C1H3g02500 | C2H3g18088 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| CX3g026242 | 3:29,152,056-29,154,456 | + | C1H3g16167 | C2H3g29659 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| CX3g029420 | 3:29,172,457-29,175,603 | - | C1H3g18285 | C2H3g18957 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| CX3g031296 | 3:29,180,248-29,182,214 | - | C1H3g24157 | C2H3g16088 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| CX3g026830 | 3:29,184,606-29,187,485 | - | C1H3g08569 | C2H3g07304 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| CX3g027104 | 3:29,188,900-29,195,232 | - | C1H3g25183 | C2H3g22264 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| CX3g026117 | 3:29,199,483-29,199,662 | + | - | - | - | - | - | Detail |
| CX3g027732 | 3:29,200,388-29,205,275 | - | C1H3g07989 | C2H3g18479 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| CX3g030336 | 3:29,205,581-29,206,154 | + | C1H3g04866 | C2H3g11581 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| CX3g030173 | 3:29,244,636-29,244,905 | - | - | - | - | - | - | Detail |
| CX3g027817 | 3:29,246,658-29,247,068 | + | - | - | - | Os03g0757750 | - | Detail |