| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g30271 | 9:6,586,035-6,590,431 | + | C1H9g31684 | CX9g056555 | LOC_Os09g12650 | Os09g0298100 | OsPFP1α4 | Detail |
| C2H9g02028 | 9:6,591,154-6,595,707 | - | C1H9g00979 | CX9g057527 | LOC_Os09g12660 | Os09g0298200 | - | Detail |
| C2H9g04760 | 9:6,601,840-6,606,943 | + | C1H9g04278 | CX9g056017 | LOC_Os09g12710 | Os09g0298400 | - | Detail |
| C2H9g25888 | 9:6,608,455-6,613,582 | - | C1H9g29739 | CX9g056522 | LOC_Os09g12720 | Os09g0298500 | - | Detail |
| C2H9g07648 | 9:6,627,820-6,635,059 | - | C1H9g12166 | CX9g057949 | LOC_Os09g12730 | Os09g0298700 | OsRRM | Detail |
| C2H9g25106 | 9:6,645,899-6,651,968 | + | C1H9g29394 | CX9g057083 | LOC_Os09g12750 | Os09g0299000 | OsPHL3 | Detail |
| C2H9g10023 | 9:6,659,511-6,662,020 | + | C1H9g12987 | CX9g057083 | LOC_Os09g12770 | Os09g0299200 | OsMYBc, MYBc | Detail |
| C2H9g16293 | 9:6,666,876-6,667,343 | - | - | CX9g057071 | LOC_Os05g28490 | Os05g0353100 | - | Detail |
| C2H9g22093 | 9:6,671,277-6,671,754 | + | C1H9g12401 | CX9g058183 | LOC_Os09g12780 | Os09g0299300 | - | Detail |
| C2H9g17440 | 9:6,675,588-6,679,807 | - | C1H9g11121 | CX9g056426 | LOC_Os09g12790 | Os09g0299400 | - | Detail |
| C2H9g04412 | 9:6,685,411-6,690,223 | - | C1H9g03619 | CX9g056639 | LOC_Os09g12800 | Os09g0299500 | - | Detail |
| C2H9g28630 | 9:6,697,816-6,698,818 | + | C1H9g06978 | CX9g055574 | - | - | - | Detail |
| C2H9g11004 | 9:6,770,583-6,772,095 | + | C1H9g07532 | CX9g054975 | LOC_Os09g12970 | Os09g0300800 | - | Detail |
| C2H9g22626 | 9:6,859,083-6,862,766 | + | C1H9g07532 | CX9g055982 | LOC_Os09g13040 | Os09g0301800 | - | Detail |
| C2H9g13623 | 9:6,922,969-6,924,840 | + | C1H9g12330 | CX9g055202 | LOC_Os09g12840 | Os09g0304500 | - | Detail |
| C2H9g29161 | 9:6,995,950-7,001,399 | - | C1H9g07879 | CX9g055039 | LOC_Os09g13110 | Os02g0129000 | - | Detail |
| C2H9g09345 | 9:7,005,152-7,005,572 | + | C1H11g23968 | CX9g056756 | LOC_Os10g01790 | - | - | Detail |
| C2H9g30162 | 9:7,008,839-7,011,048 | + | C1H9g24944 | CX9g055992 | LOC_Os09g17680 | Os09g0345700 | - | Detail |
| C2H9g17177 | 9:7,018,258-7,019,392 | - | C1H9g05000 | - | LOC_Os09g17660 | Os09g0345500 | - | Detail |
| C2H9g11168 | 9:7,022,027-7,022,898 | - | C1H9g04492 | - | LOC_Os09g17650 | Os09g0345400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031002 | 3:29,089,446-29,095,556 | - | C1H3g02242 | C2H3g26951 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| CX3g030268 | 3:29,105,338-29,106,717 | - | C1H3g31832 | C2H3g17415 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| CX3g026043 | 3:29,112,421-29,113,551 | + | C1H3g27471 | C2H3g04287 | - | - | - | Detail |
| CX3g027702 | 3:29,115,431-29,118,414 | - | C1H3g27092 | C2H3g04194 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| CX3g025245 | 3:29,119,820-29,119,981 | - | - | - | - | - | - | Detail |
| CX3g030330 | 3:29,122,434-29,125,176 | + | C1H3g31483 | C2H3g28760 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| CX3g025057 | 3:29,126,821-29,127,459 | - | - | - | - | - | - | Detail |
| CX3g030692 | 3:29,127,979-29,132,969 | + | C1H3g01206 | C2H3g21643 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| CX3g030684 | 3:29,133,597-29,142,065 | + | C1H3g11086 | C2H3g21643 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| CX3g030008 | 3:29,143,611-29,148,496 | + | C1H3g02500 | C2H3g18088 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| CX3g026242 | 3:29,152,056-29,154,456 | + | C1H3g16167 | C2H3g29659 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| CX3g029420 | 3:29,172,457-29,175,603 | - | C1H3g18285 | C2H3g18957 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| CX3g031296 | 3:29,180,248-29,182,214 | - | C1H3g24157 | C2H3g16088 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| CX3g026830 | 3:29,184,606-29,187,485 | - | C1H3g08569 | C2H3g07304 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| CX3g027104 | 3:29,188,900-29,195,232 | - | C1H3g25183 | C2H3g22264 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| CX3g026117 | 3:29,199,483-29,199,662 | + | - | - | - | - | - | Detail |
| CX3g027732 | 3:29,200,388-29,205,275 | - | C1H3g07989 | C2H3g18479 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| CX3g030336 | 3:29,205,581-29,206,154 | + | C1H3g04866 | C2H3g11581 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| CX3g030173 | 3:29,244,636-29,244,905 | - | - | - | - | - | - | Detail |
| CX3g027817 | 3:29,246,658-29,247,068 | + | - | - | - | Os03g0757750 | - | Detail |