| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11484 | 5:24,530,322-24,533,767 | + | C1H5g28475 | CX5g039824 | LOC_Os05g50950 | Os05g0586900 | - | Detail |
| C2H5g29430 | 5:24,533,869-24,536,173 | - | C1H5g12900 | CX5g038144 | LOC_Os05g50960 | Os05g0587000 | - | Detail |
| C2H5g22520 | 5:24,538,093-24,542,616 | - | C1H5g28542 | CX5g038565 | LOC_Os05g50970 | Os05g0587100 | - | Detail |
| C2H5g13453 | 5:24,545,392-24,549,578 | + | C1H5g23902 | CX5g038972 | LOC_Os05g50980 | Os05g0587200 | - | Detail |
| C2H5g04498 | 5:24,551,230-24,555,390 | - | C1H5g05422 | CX5g038828 | LOC_Os05g50990 | Os05g0587300 | - | Detail |
| C2H5g26610 | 5:24,565,141-24,567,626 | - | C1H5g00207 | CX5g039424 | LOC_Os05g51000 | Os05g0587400 | - | Detail |
| C2H5g23551 | 5:24,571,925-24,574,103 | - | C1H5g22939 | CX5g038264 | LOC_Os05g51020 | Os05g0587700 | - | Detail |
| C2H5g16401 | 5:24,580,900-24,583,666 | - | C1H5g10111 | CX5g040862 | LOC_Os05g51050 | Os05g0588100 | - | Detail |
| C2H5g01309 | 5:24,588,330-24,590,584 | - | C1H5g02565 | CX5g040689 | LOC_Os05g51060 | Os05g0588200 | OsPTD1 | Detail |
| C2H5g01521 | 5:24,593,534-24,597,835 | + | C1H5g03972 | CX5g037056 | LOC_Os05g51070 | Os05g0588300 | - | Detail |
| C2H5g15276 | 5:24,600,370-24,601,676 | - | C1H5g19495 | CX5g038358 | LOC_Os05g51090 | Os05g0588500 | SWEET5, OsSWEET5 | Detail |
| C2H5g28115 | 5:24,604,263-24,604,780 | - | C1H5g16076 | - | - | - | - | Detail |
| C2H5g12592 | 5:24,609,390-24,615,854 | - | C1H5g07091 | CX5g037152 | LOC_Os05g51110 | Os05g0588700 | - | Detail |
| C2H5g14806 | 5:24,616,610-24,624,955 | + | C1H5g04606 | - | - | - | - | Detail |
| C2H5g18087 | 5:24,618,561-24,620,461 | - | C1H5g21708 | CX5g037008 | LOC_Os05g51130 | Os05g0588850 | - | Detail |
| C2H5g11157 | 5:24,622,002-24,623,573 | - | C1H5g29117 | CX5g037581 | LOC_Os05g51130 | Os05g0588900 | - | Detail |
| C2H5g00751 | 5:24,626,674-24,630,096 | + | C1H5g25345 | CX5g037769 | LOC_Os05g51140 | Os05g0589000 | - | Detail |
| C2H5g06581 | 5:24,631,051-24,633,748 | + | C1H5g16036 | CX5g039079 | LOC_Os05g51150 | Os05g0589200 | - | Detail |
| C2H5g10509 | 5:24,635,850-24,636,821 | - | C1H5g14286 | CX5g039463 | LOC_Os05g51160 | Os05g0589400 | - | Detail |
| C2H5g25842 | 5:24,638,393-24,641,638 | + | C1H5g11554 | CX5g037667 | LOC_Os05g51180 | Os05g0589600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031002 | 3:29,089,446-29,095,556 | - | C1H3g02242 | C2H3g26951 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| CX3g030268 | 3:29,105,338-29,106,717 | - | C1H3g31832 | C2H3g17415 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| CX3g026043 | 3:29,112,421-29,113,551 | + | C1H3g27471 | C2H3g04287 | - | - | - | Detail |
| CX3g027702 | 3:29,115,431-29,118,414 | - | C1H3g27092 | C2H3g04194 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| CX3g025245 | 3:29,119,820-29,119,981 | - | - | - | - | - | - | Detail |
| CX3g030330 | 3:29,122,434-29,125,176 | + | C1H3g31483 | C2H3g28760 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| CX3g025057 | 3:29,126,821-29,127,459 | - | - | - | - | - | - | Detail |
| CX3g030692 | 3:29,127,979-29,132,969 | + | C1H3g01206 | C2H3g21643 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| CX3g030684 | 3:29,133,597-29,142,065 | + | C1H3g11086 | C2H3g21643 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| CX3g030008 | 3:29,143,611-29,148,496 | + | C1H3g02500 | C2H3g18088 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| CX3g026242 | 3:29,152,056-29,154,456 | + | C1H3g16167 | C2H3g29659 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| CX3g029420 | 3:29,172,457-29,175,603 | - | C1H3g18285 | C2H3g18957 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| CX3g031296 | 3:29,180,248-29,182,214 | - | C1H3g24157 | C2H3g16088 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| CX3g026830 | 3:29,184,606-29,187,485 | - | C1H3g08569 | C2H3g07304 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| CX3g027104 | 3:29,188,900-29,195,232 | - | C1H3g25183 | C2H3g22264 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| CX3g026117 | 3:29,199,483-29,199,662 | + | - | - | - | - | - | Detail |
| CX3g027732 | 3:29,200,388-29,205,275 | - | C1H3g07989 | C2H3g18479 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| CX3g030336 | 3:29,205,581-29,206,154 | + | C1H3g04866 | C2H3g11581 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| CX3g030173 | 3:29,244,636-29,244,905 | - | - | - | - | - | - | Detail |
| CX3g027817 | 3:29,246,658-29,247,068 | + | - | - | - | Os03g0757750 | - | Detail |