| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27512 | 1:33,363,747-33,368,876 | + | C2H1g12820 | CX1g001484 | LOC_Os01g64970 | Os01g0869900 | SAPK4, OsSAPK4 | Detail |
| C1H1g13667 | 1:33,369,268-33,374,670 | - | C2H1g15095 | CX1g002784 | LOC_Os01g64980 | Os01g0870100 | - | Detail |
| C1H1g03643 | 1:33,377,648-33,382,173 | + | C2H1g13430 | CX1g005766 | LOC_Os01g64990 | Os01g0870201 | - | Detail |
| C1H1g25940 | 1:33,383,127-33,389,151 | + | C2H1g08641 | CX1g004934 | LOC_Os01g64990 | Os01g0870300 | OsAMT3;1 | Detail |
| C1H1g13069 | 1:33,391,410-33,392,506 | + | C2H1g07832 | CX1g001460 | LOC_Os01g65000 | Os01g0831900 | - | Detail |
| C1H1g14637 | 1:33,393,995-33,394,504 | + | C2H1g07832 | CX1g001460 | LOC_Os01g65000 | Os01g0831900 | - | Detail |
| C1H1g23698 | 1:33,395,491-33,401,972 | - | C2H1g11379 | CX1g006514 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C1H1g07139 | 1:33,402,061-33,403,231 | - | C2H1g20125 | CX1g006514 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C1H1g23372 | 1:33,411,620-33,412,095 | - | C2H1g20125 | CX1g001391 | LOC_Os01g65030 | Os01g0642700 | SDRLP-4 | Detail |
| C1H1g27684 | 1:33,414,470-33,415,492 | - | C2H1g08106 | CX1g001391 | LOC_Os01g65010 | Os01g0870500 | - | Detail |
| C1H1g27436 | 1:33,415,833-33,417,181 | - | C2H1g20125 | CX1g001391 | LOC_Os01g65030 | Os01g0870400 | SDRLK-16 | Detail |
| C1H1g16493 | 1:33,428,222-33,430,348 | + | C2H1g11379 | CX1g004252 | LOC_Os01g65060 | Os01g0871000 | SDRLK-70 | Detail |
| C1H1g29415 | 1:33,431,783-33,438,633 | + | C2H1g28915 | CX1g002432 | LOC_Os01g65070 | Os01g0871100 | - | Detail |
| C1H1g03641 | 1:33,446,117-33,451,138 | + | C2H1g00963 | CX1g005777 | LOC_Os01g65090 | Os01g0871300 | - | Detail |
| C1H1g20493 | 1:33,451,777-33,453,684 | - | C2H1g24816 | CX1g000514 | LOC_Os01g65094 | Os01g0871350 | - | Detail |
| C1H1g22072 | 1:33,457,712-33,460,587 | + | C2H1g04874 | CX1g000896 | LOC_Os01g65110 | Os01g0871500 | - | Detail |
| C1H1g21395 | 1:33,463,180-33,465,082 | + | C2H1g16882 | CX1g000896 | LOC_Os01g65110 | Os01g0871600 | POT | Detail |
| C1H1g10480 | 1:33,473,643-33,474,157 | + | C2H1g16169 | CX1g000896 | LOC_Os01g65120 | Os01g0871700 | SBM1 | Detail |
| C1H1g15082 | 1:33,474,266-33,475,563 | + | C2H1g03879 | CX1g000896 | LOC_Os01g65120 | Os01g0872400 | - | Detail |
| C1H1g26845 | 1:33,478,845-33,479,276 | + | C2H1g24640 | CX1g000896 | LOC_Os01g65130 | Os01g0871800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031002 | 3:29,089,446-29,095,556 | - | C1H3g02242 | C2H3g26951 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| CX3g030268 | 3:29,105,338-29,106,717 | - | C1H3g31832 | C2H3g17415 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| CX3g026043 | 3:29,112,421-29,113,551 | + | C1H3g27471 | C2H3g04287 | - | - | - | Detail |
| CX3g027702 | 3:29,115,431-29,118,414 | - | C1H3g27092 | C2H3g04194 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| CX3g025245 | 3:29,119,820-29,119,981 | - | - | - | - | - | - | Detail |
| CX3g030330 | 3:29,122,434-29,125,176 | + | C1H3g31483 | C2H3g28760 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| CX3g025057 | 3:29,126,821-29,127,459 | - | - | - | - | - | - | Detail |
| CX3g030692 | 3:29,127,979-29,132,969 | + | C1H3g01206 | C2H3g21643 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| CX3g030684 | 3:29,133,597-29,142,065 | + | C1H3g11086 | C2H3g21643 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| CX3g030008 | 3:29,143,611-29,148,496 | + | C1H3g02500 | C2H3g18088 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| CX3g026242 | 3:29,152,056-29,154,456 | + | C1H3g16167 | C2H3g29659 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| CX3g029420 | 3:29,172,457-29,175,603 | - | C1H3g18285 | C2H3g18957 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| CX3g031296 | 3:29,180,248-29,182,214 | - | C1H3g24157 | C2H3g16088 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| CX3g026830 | 3:29,184,606-29,187,485 | - | C1H3g08569 | C2H3g07304 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| CX3g027104 | 3:29,188,900-29,195,232 | - | C1H3g25183 | C2H3g22264 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| CX3g026117 | 3:29,199,483-29,199,662 | + | - | - | - | - | - | Detail |
| CX3g027732 | 3:29,200,388-29,205,275 | - | C1H3g07989 | C2H3g18479 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| CX3g030336 | 3:29,205,581-29,206,154 | + | C1H3g04866 | C2H3g11581 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| CX3g030173 | 3:29,244,636-29,244,905 | - | - | - | - | - | - | Detail |
| CX3g027817 | 3:29,246,658-29,247,068 | + | - | - | - | Os03g0757750 | - | Detail |