| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g14207 | 3:133,794-134,079 | - | - | CX3g030057 | - | Os03g0102000 | - | Detail |
| C2H3g00981 | 3:133,870-138,264 | + | C1H3g25020 | CX3g027602 | LOC_Os03g01230 | Os03g0102200 | - | Detail |
| C2H3g16038 | 3:142,600-153,389 | + | C1H3g05989 | CX3g029938 | LOC_Os03g01240 | Os03g0102300 | - | Detail |
| C2H3g07325 | 3:155,037-159,615 | + | C1H3g05608 | CX3g029938 | LOC_Os03g01240 | Os03g0102366 | - | Detail |
| C2H3g23495 | 3:159,429-164,729 | - | C1H3g25301 | CX3g027923 | LOC_Os03g01250 | Os03g0102400 | - | Detail |
| C2H3g09146 | 3:168,302-169,141 | - | C1H3g20737 | CX3g028399 | LOC_Os03g01260 | Os03g0102500 | - | Detail |
| C2H3g19463 | 3:174,039-175,541 | + | C1H3g18000 | CX3g030913 | LOC_Os03g01270 | Os03g0102700 | OsEXPB7 | Detail |
| C2H3g08091 | 3:184,712-188,564 | + | C1H3g03491 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C2H3g23946 | 3:189,670-191,920 | + | - | - | - | - | - | Detail |
| C2H3g24645 | 3:196,980-197,405 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103100 | - | Detail |
| C2H3g00230 | 3:199,926-200,357 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103200 | - | Detail |
| C2H3g27129 | 3:208,983-209,564 | + | C1H3g18184 | CX3g025864 | LOC_Os03g01320 | Os03g0103300 | qLTG-3-1(t), qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5 | Detail |
| C2H3g00666 | 3:218,224-219,759 | + | C1H3g24558 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C2H3g07381 | 3:229,277-231,060 | + | C1H3g28077 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C2H3g12984 | 3:233,719-235,979 | - | C1H3g23454 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C2H3g00326 | 3:237,525-241,430 | - | C1H3g02722 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C2H3g00355 | 3:244,970-247,830 | - | C1H3g03839 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C2H3g00823 | 3:249,623-254,908 | - | C1H3g18280 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C2H3g10053 | 3:258,131-262,210 | - | C1H3g03593 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C2H3g14376 | 3:262,800-267,287 | - | C1H3g13137 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031238 | 3:28,936,126-28,945,159 | - | C1H3g11162 | C2H3g22149 | LOC_Os03g53880 | Os03g0749800 | - | Detail |
| CX3g030383 | 3:28,945,839-28,947,267 | + | C1H3g23610 | C2H3g15338 | LOC_Os03g53890 | Os03g0749900 | - | Detail |
| CX3g029891 | 3:28,947,903-28,948,729 | - | C1H3g03771 | C2H3g01456 | LOC_Os03g53900 | Os03g0750000 | - | Detail |
| CX3g029217 | 3:28,960,187-28,968,505 | + | C1H3g04679 | C2H3g18037 | LOC_Os03g53920 | Os03g0750300 | - | Detail |
| CX3g031096 | 3:28,970,248-28,970,850 | - | - | - | - | Os03g0750400 | - | Detail |
| CX3g026013 | 3:28,974,802-28,976,759 | - | C1H3g27629 | C2H3g28860 | LOC_Os03g53950 | Os03g0750700 | - | Detail |
| CX3g028825 | 3:28,982,410-28,987,828 | - | C1H3g16169 | C2H3g13208 | LOC_Os03g53960 | Os03g0750800 | - | Detail |
| CX3g025807 | 3:28,988,515-28,990,968 | - | C1H3g17674 | C2H3g05622 | LOC_Os03g53970 | Os03g0750900 | - | Detail |
| CX3g029898 | 3:28,993,565-28,994,348 | + | C1H3g30640 | C2H3g27227 | LOC_Os03g53980 | Os03g0751000 | - | Detail |
| CX3g026633 | 3:28,996,143-28,996,427 | - | C1H3g24232 | C2H3g03528 | LOC_Os03g61780 | Os03g0221500 | - | Detail |
| CX3g029143 | 3:28,998,235-29,002,856 | + | C1H3g23380 | C2H3g12979 | LOC_Os03g53990 | Os03g0751050 | - | Detail |
| CX3g026203 | 3:29,003,851-29,007,624 | - | C1H3g12600 | C2H3g03358 | LOC_Os03g54000 | Os03g0751100 | - | Detail |
| CX3g028609 | 3:29,014,744-29,019,964 | + | C1H3g12783 | C2H3g28171 | LOC_Os03g54040 | Os03g0751400 | - | Detail |
| CX3g027092 | 3:29,026,002-29,026,841 | + | C1H3g07489 | C2H3g04305 | LOC_Os03g54050 | Os03g0751600 | - | Detail |
| CX3g030127 | 3:29,036,484-29,040,950 | + | C1H3g19762 | C2H3g09716 | LOC_Os03g54084 | Os03g0752100 | PHYC | Detail |
| CX3g031059 | 3:29,041,753-29,045,743 | + | C1H3g25474 | C2H3g05209 | LOC_Os03g54091 | Os03g0752200 | OsSPO11-1, OsTOP6A1 | Detail |
| CX3g026511 | 3:29,047,083-29,048,212 | - | C1H3g21048 | C2H3g18265 | LOC_Os03g54100 | Os03g0752300 | TPKA, TPKa, OsTPKa | Detail |
| CX3g030726 | 3:29,052,640-29,053,509 | - | - | - | LOC_Os03g54114 | Os03g0349700 | - | Detail |
| CX3g025106 | 3:29,055,709-29,057,134 | + | C1H3g03067 | C2H3g06363 | LOC_Os03g54130 | Os03g0752500 | - | Detail |
| CX3g030009 | 3:29,059,037-29,062,364 | + | C1H3g23694 | C2H3g21077 | LOC_Os03g54150 | Os03g0752700 | - | Detail |