| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12926 | 2:8,398,024-8,407,326 | - | C1H2g02864 | CX2g021533 | LOC_Os02g15970 | Os02g0260400 | - | Detail |
| C2H2g06594 | 2:8,421,106-8,424,884 | + | C1H2g27751 | CX2g022911 | LOC_Os02g15980 | Os02g0260500 | - | Detail |
| C2H2g13675 | 2:8,429,741-8,434,737 | + | C1H2g12308 | CX2g024506 | LOC_Os02g16000 | Os02g0260700 | - | Detail |
| C2H2g11255 | 2:8,442,972-8,447,418 | + | C1H2g28079 | CX2g022743 | LOC_Os02g16030 | Os02g0261000 | - | Detail |
| C2H2g01960 | 2:8,453,074-8,456,145 | + | C1H2g11370 | CX2g019327 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| C2H2g28917 | 2:8,474,737-8,476,580 | - | C1H2g19487 | CX2g019137 | LOC_Os02g16450 | Os02g0264300 | - | Detail |
| C2H2g15600 | 2:8,484,030-8,486,771 | + | C1H2g26765 | CX12g017249 | - | Os02g0264700 | - | Detail |
| C2H2g19236 | 2:8,491,369-8,493,017 | - | C1H2g01441 | CX2g020509 | LOC_Os02g16500 | Os02g0264800 | - | Detail |
| C2H2g18599 | 2:8,510,506-8,511,828 | + | C1H2g28048 | CX2g020341 | - | Os02g0265200 | - | Detail |
| C2H2g26523 | 2:8,519,973-8,524,819 | - | C1H2g03793 | CX2g020464 | LOC_Os02g16550 | Os02g0265400 | - | Detail |
| C2H2g05519 | 2:8,535,952-8,539,041 | + | C1H2g08201 | CX2g024020 | LOC_Os02g16600 | Os02g0265700 | - | Detail |
| C2H2g05448 | 2:8,541,749-8,543,418 | + | C1H2g01209 | CX2g024020 | LOC_Os02g16600 | - | - | Detail |
| C2H2g08731 | 2:8,547,536-8,550,180 | + | C1H2g19593 | CX2g018867 | LOC_Os02g16620 | Os02g0265900 | - | Detail |
| C2H2g11052 | 2:8,553,731-8,556,643 | + | C1H2g16850 | CX2g024509 | LOC_Os02g16630 | Os02g0266000 | - | Detail |
| C2H2g16179 | 2:8,557,636-8,560,663 | - | C1H2g16838 | CX2g020102 | LOC_Os02g16640 | Os02g0266100 | - | Detail |
| C2H2g13852 | 2:8,561,291-8,565,243 | + | C1H2g07521 | CX2g019119 | LOC_Os02g16650 | Os02g0266200 | - | Detail |
| C2H2g26198 | 2:8,565,648-8,569,602 | - | C1H2g20133 | CX2g019965 | LOC_Os02g16660 | Os02g0266300 | - | Detail |
| C2H2g08908 | 2:8,574,153-8,574,386 | + | C1H2g02204 | - | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| C2H2g01743 | 2:8,574,402-8,582,399 | + | C1H2g23899 | CX2g021513 | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| C2H2g25795 | 2:8,586,425-8,589,119 | - | C1H2g03225 | CX2g020479 | LOC_Os02g16680 | Os02g0266800 | RISBZ3, RITA1, RITA-1, OsbZIP20 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030980 | 3:28,802,147-28,802,994 | - | C1H3g19003 | C2H3g07500 | LOC_Os03g53610 | Os03g0747400 | - | Detail |
| CX3g028961 | 3:28,804,515-28,805,215 | - | C1H3g07297 | C2H3g18208 | LOC_Os03g53620 | Os03g0747500 | - | Detail |
| CX3g029239 | 3:28,810,425-28,818,315 | + | C1H3g06756 | C2H3g14898 | LOC_Os03g53630 | Os03g0747600 | - | Detail |
| CX3g026060 | 3:28,819,476-28,820,865 | - | C1H3g01485 | C2H3g17022 | LOC_Os03g53640 | Os03g0747700 | - | Detail |
| CX3g030953 | 3:28,823,356-28,825,844 | + | C1H3g24639 | C2H3g04438 | LOC_Os03g53650 | Os03g0747800 | OsOASTL-A1 | Detail |
| CX3g028107 | 3:28,829,478-28,838,480 | + | C1H3g24639 | C2H3g04438 | LOC_Os03g53660 | Os03g0747900 | OsMyoXIE-1, OsMyoXIE | Detail |
| CX3g027311 | 3:28,843,361-28,846,820 | + | C1H3g16019 | C2H3g18336 | LOC_Os03g53670 | Os03g0748000 | - | Detail |
| CX3g029069 | 3:28,852,463-28,853,296 | + | C1H3g25433 | C2H3g11149 | LOC_Os03g53690 | Os03g0748100 | - | Detail |
| CX3g030125 | 3:28,856,193-28,858,668 | + | C1H3g23351 | C2H3g11510 | LOC_Os03g53700 | Os03g0748200 | - | Detail |
| CX3g025504 | 3:28,861,040-28,862,884 | - | C1H3g03701 | C2H3g13290 | LOC_Os03g53710 | Os03g0748300 | - | Detail |
| CX3g028761 | 3:28,868,127-28,871,752 | + | C1H3g01499 | C2H3g11594 | LOC_Os03g53720 | Os03g0748400 | - | Detail |
| CX3g026934 | 3:28,872,571-28,873,031 | - | C1H3g16971 | C2H3g19078 | LOC_Os03g53730 | Os03g0748500 | - | Detail |
| CX3g025608 | 3:28,873,798-28,874,516 | + | C1H3g08884 | C2H3g00251 | LOC_Os03g53740 | Os03g0748600 | - | Detail |
| CX3g030809 | 3:28,875,331-28,879,310 | - | C1H3g17123 | C2H3g14266 | LOC_Os03g53750 | Os03g0748700 | - | Detail |
| CX3g025195 | 3:28,880,450-28,887,092 | - | C1H3g07089 | C2H3g05037 | LOC_Os03g53760 | Os03g0748800 | - | Detail |
| CX3g031121 | 3:28,891,247-28,894,128 | + | C1H3g00309 | C2H3g13679 | LOC_Os03g53770 | Os03g0748900 | - | Detail |
| CX3g026615 | 3:28,896,164-28,897,137 | + | C1H3g04060 | C2H3g21930 | LOC_Os03g53780 | Os03g0749000 | - | Detail |
| CX3g029322 | 3:28,899,762-28,902,258 | + | C1H3g20459 | C2H3g30032 | LOC_Os03g53790 | Os03g0749100 | - | Detail |
| CX3g029115 | 3:28,915,577-28,918,584 | + | C1H3g09581 | C2H3g10265 | LOC_Os03g53800 | Os03g0749300 | - | Detail |
| CX3g027044 | 3:28,931,409-28,934,123 | + | C1H3g06500 | C2H3g17987 | LOC_Os03g53860 | Os03g0749500 | - | Detail |