| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g23814 | 5:15,200,594-15,202,600 | + | C2H5g15340 | CX5g040937 | LOC_Os05g32170 | Os05g0387700 | - | Detail |
| C1H5g18069 | 5:15,209,282-15,211,531 | - | C2H5g16678 | CX5g039837 | LOC_Os05g32180 | Os05g0387800 | - | Detail |
| C1H5g07636 | 5:15,217,262-15,219,529 | - | C2H5g20954 | CX5g041134 | LOC_Os05g32190 | Os05g0387900 | - | Detail |
| C1H5g04295 | 5:15,219,946-15,225,810 | - | C2H5g04124 | CX5g037831 | - | Os05g0388151 | - | Detail |
| C1H5g01058 | 5:15,224,764-15,234,208 | + | C2H5g24913 | CX5g040647 | LOC_Os05g32210 | Os05g0388400 | - | Detail |
| C1H5g02248 | 5:15,238,795-15,242,905 | + | C2H5g17569 | CX5g037221 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| C1H5g17467 | 5:15,251,814-15,257,289 | + | C2H5g24466 | CX5g040484 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| C1H5g21069 | 5:15,259,669-15,260,103 | - | - | - | - | - | - | Detail |
| C1H5g20766 | 5:15,278,499-15,282,586 | + | C2H5g28293 | CX5g040873 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| C1H5g02261 | 5:15,297,246-15,299,221 | - | C2H5g13580 | CX5g037113 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| C1H5g02591 | 5:15,302,156-15,305,132 | + | C2H5g20984 | CX5g038872 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| C1H5g03931 | 5:15,305,329-15,309,251 | - | C2H5g00884 | CX5g040346 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| C1H5g28425 | 5:15,318,034-15,322,563 | + | C2H5g20289 | CX5g041113 | LOC_Os05g32350 | Os05g0389600 | - | Detail |
| C1H5g01584 | 5:15,324,220-15,327,881 | + | C2H5g14052 | CX5g036712 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| C1H5g08791 | 5:15,328,161-15,331,631 | - | C2H5g22345 | CX5g040013 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| C1H5g14444 | 5:15,338,823-15,344,434 | - | C2H5g07557 | CX5g038787 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| C1H5g04632 | 5:15,348,218-15,357,040 | + | C2H5g06582 | CX5g037880 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| C1H5g17717 | 5:15,369,728-15,370,582 | + | C2H5g28202 | CX5g037525 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| C1H5g25353 | 5:15,378,397-15,383,367 | + | C2H5g02167 | CX5g038717 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| C1H5g07431 | 5:15,393,392-15,394,558 | - | C2H5g15789 | CX5g037050 | LOC_Os05g32440 | Os05g0390600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027888 | 3:28,677,173-28,678,753 | + | C1H3g09606 | C2H3g24773 | LOC_Os03g53300 | Os03g0744700 | - | Detail |
| CX3g026014 | 3:28,679,608-28,682,235 | - | C1H3g24701 | C2H3g01337 | LOC_Os03g53310 | Os03g0744800 | - | Detail |
| CX3g027820 | 3:28,683,064-28,683,627 | - | - | - | - | - | - | Detail |
| CX3g030228 | 3:28,686,656-28,687,770 | - | C1H3g09693 | C2H3g19484 | LOC_Os03g53340 | Os03g0854500 | - | Detail |
| CX3g028800 | 3:28,689,463-28,690,835 | + | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0722500 | - | Detail |
| CX3g025853 | 3:28,692,513-28,693,961 | - | C1H3g18325 | C2H3g02177 | LOC_Os03g53350 | Os03g0745100 | - | Detail |
| CX3g026253 | 3:28,697,710-28,699,544 | - | C1H3g27592 | C2H3g14025 | LOC_Os03g53360 | Os03g0185700 | - | Detail |
| CX3g031338 | 3:28,707,946-28,708,730 | + | C1H3g01029 | C2H3g10861 | LOC_Os03g53400 | Os03g0745600 | - | Detail |
| CX3g029461 | 3:28,710,579-28,713,843 | + | C1H3g24433 | C2H3g06392 | LOC_Os03g53410 | Os03g0745700 | - | Detail |
| CX3g028293 | 3:28,734,569-28,734,904 | + | - | - | - | - | - | Detail |
| CX3g028894 | 3:28,740,329-28,740,772 | + | C1H3g31784 | C2H3g15461 | - | - | - | Detail |
| CX3g025094 | 3:28,743,447-28,743,689 | - | - | - | - | Os01g0184200 | - | Detail |
| CX3g029330 | 3:28,750,795-28,759,622 | - | C1H3g23592 | C2H3g24012 | LOC_Os03g53500 | Os03g0746500 | - | Detail |
| CX3g026530 | 3:28,760,290-28,762,732 | + | C1H3g25130 | C2H3g13665 | LOC_Os03g53510 | Os03g0746600 | - | Detail |
| CX3g028030 | 3:28,765,506-28,766,330 | - | C1H3g03624 | C2H3g13481 | LOC_Os03g53520 | Os03g0746700 | - | Detail |
| CX3g027302 | 3:28,773,099-28,776,093 | - | C1H3g29559 | C2H3g00171 | LOC_Os03g53530 | Os03g0746800 | - | Detail |
| CX3g027162 | 3:28,780,624-28,781,031 | + | C1H3g16143 | C2H3g01208 | LOC_Os03g53540 | Os03g0746900 | - | Detail |
| CX3g030056 | 3:28,785,418-28,787,112 | + | C1H3g09317 | C2H3g14539 | LOC_Os03g53580 | Os03g0747100 | - | Detail |
| CX3g026901 | 3:28,789,010-28,795,121 | - | C1H3g22291 | C2H3g02909 | LOC_Os03g53590 | Os03g0747200 | - | Detail |
| CX3g028280 | 3:28,798,174-28,801,528 | + | C1H3g07497 | C2H3g11811 | LOC_Os03g53600 | Os03g0747300 | - | Detail |