| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027888 | 3:28,677,173-28,678,753 | + | C1H3g09606 | C2H3g24773 | LOC_Os03g53300 | Os03g0744700 | - | Detail |
| CX3g026014 | 3:28,679,608-28,682,235 | - | C1H3g24701 | C2H3g01337 | LOC_Os03g53310 | Os03g0744800 | - | Detail |
| CX3g027820 | 3:28,683,064-28,683,627 | - | - | - | - | - | - | Detail |
| CX3g030228 | 3:28,686,656-28,687,770 | - | C1H3g09693 | C2H3g19484 | LOC_Os03g53340 | Os03g0854500 | - | Detail |
| CX3g028800 | 3:28,689,463-28,690,835 | + | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0722500 | - | Detail |
| CX3g025853 | 3:28,692,513-28,693,961 | - | C1H3g18325 | C2H3g02177 | LOC_Os03g53350 | Os03g0745100 | - | Detail |
| CX3g026253 | 3:28,697,710-28,699,544 | - | C1H3g27592 | C2H3g14025 | LOC_Os03g53360 | Os03g0185700 | - | Detail |
| CX3g031338 | 3:28,707,946-28,708,730 | + | C1H3g01029 | C2H3g10861 | LOC_Os03g53400 | Os03g0745600 | - | Detail |
| CX3g029461 | 3:28,710,579-28,713,843 | + | C1H3g24433 | C2H3g06392 | LOC_Os03g53410 | Os03g0745700 | - | Detail |
| CX3g028293 | 3:28,734,569-28,734,904 | + | - | - | - | - | - | Detail |
| CX3g028894 | 3:28,740,329-28,740,772 | + | C1H3g31784 | C2H3g15461 | - | - | - | Detail |
| CX3g025094 | 3:28,743,447-28,743,689 | - | - | - | - | Os01g0184200 | - | Detail |
| CX3g029330 | 3:28,750,795-28,759,622 | - | C1H3g23592 | C2H3g24012 | LOC_Os03g53500 | Os03g0746500 | - | Detail |
| CX3g026530 | 3:28,760,290-28,762,732 | + | C1H3g25130 | C2H3g13665 | LOC_Os03g53510 | Os03g0746600 | - | Detail |
| CX3g028030 | 3:28,765,506-28,766,330 | - | C1H3g03624 | C2H3g13481 | LOC_Os03g53520 | Os03g0746700 | - | Detail |
| CX3g027302 | 3:28,773,099-28,776,093 | - | C1H3g29559 | C2H3g00171 | LOC_Os03g53530 | Os03g0746800 | - | Detail |
| CX3g027162 | 3:28,780,624-28,781,031 | + | C1H3g16143 | C2H3g01208 | LOC_Os03g53540 | Os03g0746900 | - | Detail |
| CX3g030056 | 3:28,785,418-28,787,112 | + | C1H3g09317 | C2H3g14539 | LOC_Os03g53580 | Os03g0747100 | - | Detail |
| CX3g026901 | 3:28,789,010-28,795,121 | - | C1H3g22291 | C2H3g02909 | LOC_Os03g53590 | Os03g0747200 | - | Detail |
| CX3g028280 | 3:28,798,174-28,801,528 | + | C1H3g07497 | C2H3g11811 | LOC_Os03g53600 | Os03g0747300 | - | Detail |