| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g13821 | 5:19,293,517-19,296,595 | + | C1H5g25663 | CX5g040208 | LOC_Os05g39110 | Os05g0467300 | - | Detail |
| C2H5g22884 | 5:19,297,853-19,299,913 | + | C1H5g14944 | CX5g039101 | LOC_Os05g39120 | Os05g0467400 | - | Detail |
| C2H5g01596 | 5:19,303,265-19,307,233 | - | C1H5g21928 | CX5g040026 | LOC_Os05g39140 | Os05g0467600 | - | Detail |
| C2H5g19533 | 5:19,310,099-19,311,990 | + | C1H5g14390 | CX5g039101 | LOC_Os05g39150 | Os05g0467700 | - | Detail |
| C2H5g29716 | 5:19,314,528-19,317,718 | + | C1H5g15611 | CX5g039101 | LOC_Os05g39160 | Os05g0468100 | - | Detail |
| C2H5g16633 | 5:19,319,482-19,321,660 | + | C1H5g01223 | CX5g039101 | LOC_Os05g39180 | Os05g0468100 | - | Detail |
| C2H5g08374 | 5:19,323,556-19,325,638 | + | C1H5g19061 | CX5g039101 | LOC_Os05g39190 | Os05g0468200 | - | Detail |
| C2H5g06748 | 5:19,328,977-19,331,269 | + | C1H5g19061 | CX5g039101 | LOC_Os05g39200 | Os05g0468200 | - | Detail |
| C2H5g21881 | 5:19,335,010-19,337,330 | + | C1H5g10537 | CX5g039447 | LOC_Os05g39210 | Os05g0468400 | - | Detail |
| C2H5g02966 | 5:19,338,327-19,339,862 | - | C1H5g21975 | CX5g036720 | LOC_Os05g39220 | Os05g0468500 | - | Detail |
| C2H5g13151 | 5:19,342,137-19,350,468 | + | C1H5g17365 | CX5g040929 | LOC_Os05g39230 | Os05g0468600 | - | Detail |
| C2H5g02700 | 5:19,354,003-19,357,733 | + | C1H5g05340 | CX5g037578 | LOC_Os05g39240 | Os05g0468700 | OsAMT2;1 | Detail |
| C2H5g27707 | 5:19,357,954-19,358,552 | - | C1H5g00101 | CX5g040210 | LOC_Os05g39250 | Os05g0468800 | - | Detail |
| C2H5g13753 | 5:19,365,770-19,366,363 | + | C1H5g30545 | CX5g037066 | LOC_Os05g39260 | Os05g0468900 | - | Detail |
| C2H5g09443 | 5:19,376,441-19,376,650 | - | - | - | - | - | - | Detail |
| C2H5g18865 | 5:19,382,954-19,385,976 | + | C1H5g01899 | CX5g036944 | LOC_Os05g39310 | Os05g0469600 | Ospdc1 | Detail |
| C2H5g07982 | 5:19,389,405-19,390,007 | + | C1H5g17771 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C2H5g08481 | 5:19,390,026-19,391,728 | + | C1H5g02466 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C2H5g06883 | 5:19,392,592-19,395,652 | - | C1H5g04421 | CX5g040121 | LOC_Os05g39350 | Os05g0470000 | - | Detail |
| C2H5g13574 | 5:19,406,603-19,408,197 | + | - | CX5g040668 | LOC_Os05g39370 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |