| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g29547 | 1:16,832,878-16,835,248 | - | C1H1g16518 | CX1g002333 | LOC_Os01g32780 | Os01g0511100 | OsUSP5 | Detail |
| C2H1g25988 | 1:16,837,023-16,840,169 | - | C1H1g30895 | CX1g000349 | LOC_Os01g32790 | Os01g0511200 | - | Detail |
| C2H1g01415 | 1:16,841,809-16,845,294 | - | C1H1g00873 | CX1g005541 | LOC_Os01g32800 | Os01g0511300 | OsRpn9a | Detail |
| C2H1g19462 | 1:16,860,843-16,864,257 | - | C1H1g16898 | CX1g003225 | LOC_Os01g32830 | Os01g0511600 | OsPLGG1 | Detail |
| C2H1g19337 | 1:16,899,183-16,907,044 | + | C1H1g25757 | CX1g003635 | LOC_Os01g32870 | Os01g0512100 | - | Detail |
| C2H1g17681 | 1:16,931,308-16,932,258 | + | C1H1g18492 | - | - | - | - | Detail |
| C2H1g17712 | 1:16,932,896-16,933,223 | + | C1H1g25480 | CX1g001290 | LOC_Os01g32900 | - | - | Detail |
| C2H1g03966 | 1:16,940,050-16,940,761 | + | C1H1g22771 | CX1g001290 | LOC_Os01g32920 | Os01g0512700 | - | Detail |
| C2H1g26017 | 1:16,943,373-16,944,112 | + | C1H1g27769 | CX1g001406 | LOC_Os01g32930 | Os01g0512800 | - | Detail |
| C2H1g24494 | 1:16,947,960-16,955,382 | - | C1H1g02880 | CX1g004321 | LOC_Os01g32964 | Os01g0513100 | - | Detail |
| C2H1g05942 | 1:16,965,438-16,973,952 | - | C1H1g13876 | CX1g004574 | LOC_Os01g32980 | Os01g0513200 | - | Detail |
| C2H1g28038 | 1:16,982,263-16,985,606 | + | C1H1g02604 | CX1g003028 | LOC_Os01g33000 | Os01g0513400 | - | Detail |
| C2H1g27810 | 1:16,991,444-16,993,467 | - | C1H1g22987 | CX1g006725 | LOC_Os01g33020 | Os01g0513700 | - | Detail |
| C2H1g12307 | 1:16,995,193-16,997,326 | - | C1H1g30759 | CX1g007248 | LOC_Os01g33030 | Os01g0513800 | - | Detail |
| C2H1g12454 | 1:17,015,225-17,021,837 | + | C1H1g09298 | CX1g000923 | LOC_Os01g33040 | Os01g0513900 | - | Detail |
| C2H1g17423 | 1:17,025,427-17,027,932 | - | C1H1g02667 | CX1g002054 | LOC_Os01g33050 | Os01g0514000 | - | Detail |
| C2H1g15853 | 1:17,028,304-17,038,183 | + | C1H1g14994 | CX1g000762 | LOC_Os01g33060 | Os01g0514300 | - | Detail |
| C2H1g02122 | 1:17,041,019-17,043,235 | + | C1H1g01968 | CX1g002835 | LOC_Os01g33070 | Os01g0514450 | - | Detail |
| C2H1g28988 | 1:17,052,789-17,059,255 | + | C1H1g23037 | CX1g003510 | LOC_Os01g33080 | Os01g0514600 | - | Detail |
| C2H1g05248 | 1:17,067,099-17,070,330 | + | C1H1g14522 | CX1g002745 | LOC_Os01g33090 | Os01g0514700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |