| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g02403 | 9:7,351,050-7,351,941 | + | - | CX9g056722 | LOC_Os09g16980 | Os09g0339300 | - | Detail |
| C2H9g13394 | 9:7,354,934-7,355,774 | + | C1H9g08141 | CX9g056722 | LOC_Os09g14580 | Os09g0339300 | - | Detail |
| C2H9g13463 | 9:7,369,383-7,371,975 | - | C1H9g08141 | CX9g055720 | LOC_Os09g16950 | Os09g0339000 | - | Detail |
| C2H9g09110 | 9:7,399,028-7,400,431 | - | C1H9g20883 | CX9g057549 | LOC_Os09g16920 | Os09g0338500 | OsSLD, OsCyb5 | Detail |
| C2H9g04101 | 9:7,406,623-7,410,874 | - | C1H9g19456 | CX9g056696 | LOC_Os09g16910 | Os09g0338400 | - | Detail |
| C2H9g04132 | 9:7,462,720-7,464,494 | + | C1H9g18515 | CX9g057743 | LOC_Os09g16780 | Os09g0337500 | - | Detail |
| C2H9g22118 | 9:7,470,648-7,472,173 | - | C1H9g28326 | CX9g057099 | LOC_Os09g16760 | Os09g0322500 | - | Detail |
| C2H9g26718 | 9:7,531,473-7,532,935 | - | C1H9g06883 | CX9g055556 | LOC_Os09g16590 | Os09g0339000 | - | Detail |
| C2H9g08792 | 9:7,556,200-7,558,503 | + | C1H9g08185 | CX9g056054 | LOC_Os09g16550 | Os09g0334900 | - | Detail |
| C2H9g13074 | 9:7,559,804-7,563,036 | - | C1H9g02774 | CX9g056154 | LOC_Os09g16540 | Os09g0334800 | - | Detail |
| C2H9g18190 | 9:7,573,969-7,575,464 | + | C1H9g01191 | CX9g056487 | LOC_Os09g16520 | Os09g0334600 | - | Detail |
| C2H9g25170 | 9:7,576,079-7,578,207 | - | C1H9g09036 | CX9g056065 | LOC_Os09g16510 | Os09g0334500 | WRKY74, OsWRKY74 | Detail |
| C2H9g12973 | 9:7,616,401-7,616,769 | + | C1H9g24525 | CX9g056847 | LOC_Os09g16458 | Os09g0333600 | - | Detail |
| C2H9g29450 | 9:7,627,578-7,630,135 | + | C1H9g13383 | CX9g056847 | LOC_Os09g16458 | Os09g0332700 | OsPDR20 | Detail |
| C2H9g00499 | 9:7,631,088-7,633,461 | + | C1H9g26841 | CX9g056750 | LOC_Os09g16449 | Os09g0333500 | OsPDR18, ABCG52 | Detail |
| C2H9g25636 | 9:7,664,449-7,665,097 | + | C1H9g18371 | - | - | - | - | Detail |
| C2H9g23424 | 9:7,684,172-7,688,557 | + | C1H9g10386 | CX9g056847 | LOC_Os09g16380 | Os09g0333000 | - | Detail |
| C2H9g12206 | 9:7,693,391-7,694,081 | + | C1H9g07727 | - | - | - | - | Detail |
| C2H9g07195 | 9:7,706,506-7,715,222 | + | C1H9g10386 | CX9g056847 | LOC_Os09g16330 | Os09g0332700 | OsPDR20 | Detail |
| C2H9g20373 | 9:7,730,399-7,730,686 | + | C1H9g17604 | - | LOC_Os09g16300 | Os09g0332700 | OsPDR20 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |