| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16733 | 1:21,638,112-21,645,972 | - | C2H1g00179 | CX1g006178 | LOC_Os01g42410 | Os01g0609900 | - | Detail |
| C1H1g07824 | 1:21,658,659-21,661,150 | + | C2H1g12978 | CX1g000446 | LOC_Os01g42430 | Os01g0610100 | - | Detail |
| C1H1g31299 | 1:21,666,919-21,671,985 | + | C2H1g15549 | CX1g000122 | LOC_Os01g42460 | Os01g0610300 | OsASI1, OsIBM2 | Detail |
| C1H1g17082 | 1:21,675,535-21,678,217 | + | C2H1g30233 | CX1g001787 | LOC_Os01g42470 | Os01g0610400 | - | Detail |
| C1H1g00950 | 1:21,686,172-21,689,272 | - | C2H1g01156 | CX1g004113 | LOC_Os01g42480 | Os01g0610500 | - | Detail |
| C1H1g10040 | 1:21,690,784-21,698,002 | - | C2H1g27976 | CX1g006192 | LOC_Os01g42490 | Os01g0610600 | - | Detail |
| C1H1g07937 | 1:21,698,672-21,701,638 | - | C2H1g11351 | CX1g001957 | LOC_Os01g42500 | Os01g0610700 | - | Detail |
| C1H1g20514 | 1:21,703,483-21,707,322 | - | C2H1g18697 | CX1g001059 | LOC_Os01g42510 | Os01g0610800 | - | Detail |
| C1H1g12371 | 1:21,714,358-21,717,229 | - | - | - | - | - | - | Detail |
| C1H1g18308 | 1:21,753,656-21,756,617 | + | C2H1g27995 | CX1g003691 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g31223 | 1:21,759,523-21,761,692 | + | C2H1g28850 | CX1g007042 | LOC_Os01g37800 | Os01g0611100 | OsRAN1 | Detail |
| C1H1g01107 | 1:21,763,449-21,764,815 | - | C2H1g16163 | CX1g000611 | LOC_Os01g42540 | - | - | Detail |
| C1H1g13509 | 1:21,775,742-21,778,599 | + | C2H1g24169 | CX1g002511 | LOC_Os01g42610 | Os01g0337100 | OsTPS1 | Detail |
| C1H1g26944 | 1:21,782,381-21,784,798 | - | C2H1g29383 | CX1g003287 | LOC_Os01g42620 | Os01g0611900 | - | Detail |
| C1H1g21989 | 1:21,785,625-21,789,061 | - | C2H1g14636 | CX1g005532 | LOC_Os01g42630 | Os01g0612000 | - | Detail |
| C1H1g24195 | 1:21,793,520-21,797,435 | + | C2H1g23201 | CX1g005764 | LOC_Os01g42650 | Os01g0612200 | - | Detail |
| C1H1g12693 | 1:21,827,806-21,830,455 | + | C2H1g08682 | CX1g006516 | LOC_Os01g42690 | Os01g0612500 | - | Detail |
| C1H1g19005 | 1:21,840,986-21,847,885 | + | C2H1g20504 | CX1g005902 | LOC_Os01g42710 | Os01g0612700 | LOL2, OsLOL2, OsLOL5 | Detail |
| C1H1g28272 | 1:21,848,607-21,849,535 | + | C2H1g10217 | CX1g003214 | LOC_Os01g42720 | Os01g0612800 | - | Detail |
| C1H1g20054 | 1:21,862,569-21,866,675 | + | C2H1g19518 | CX1g000139 | LOC_Os01g42730 | Os01g0612900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |