| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g03908 | 2:6,474,255-6,477,314 | + | C2H2g17422 | CX2g023753 | LOC_Os02g12910 | Os02g0222600 | - | Detail |
| C1H2g24351 | 2:6,523,717-6,524,421 | + | C2H2g08629 | CX2g021051 | LOC_Os02g13060 | Os02g0223700 | - | Detail |
| C1H2g15757 | 2:6,563,891-6,566,411 | + | C2H2g24144 | CX2g019831 | LOC_Os02g13100 | Os02g0224100 | - | Detail |
| C1H2g08066 | 2:6,572,294-6,580,216 | - | C2H2g03856 | CX2g018848 | LOC_Os02g13110 | Os02g0224200 | - | Detail |
| C1H2g24744 | 2:6,588,708-6,594,149 | + | C2H2g10494 | CX2g021841 | LOC_Os02g13130 | Os02g0224300 | - | Detail |
| C1H2g17132 | 2:6,595,072-6,603,401 | + | C2H2g14478 | CX2g019171 | LOC_Os02g13140 | Os02g0224400 | - | Detail |
| C1H2g26512 | 2:6,614,907-6,619,328 | + | C2H2g07309 | CX2g020820 | LOC_Os02g13150 | Os02g0224800 | - | Detail |
| C1H2g03138 | 2:6,621,242-6,626,399 | - | C2H2g08849 | CX2g019652 | LOC_Os02g13160 | Os02g0224900 | - | Detail |
| C1H2g19767 | 2:6,626,359-6,632,017 | + | C2H2g16941 | CX2g022426 | LOC_Os02g13170 | Os02g0225000 | - | Detail |
| C1H2g11782 | 2:6,632,586-6,633,188 | + | C2H2g16941 | CX2g020135 | LOC_Os02g13180 | Os02g0225100 | - | Detail |
| C1H2g24855 | 2:6,635,258-6,636,601 | - | C2H2g19154 | CX2g022887 | LOC_Os02g13190 | Os02g0225900 | - | Detail |
| C1H2g31635 | 2:6,641,011-6,643,022 | - | C2H2g02099 | - | LOC_Os02g13200 | Os02g0225300 | - | Detail |
| C1H2g16441 | 2:6,647,529-6,648,839 | - | C2H2g27091 | CX2g021635 | LOC_Os02g13220 | Os02g0225900 | - | Detail |
| C1H2g24185 | 2:6,655,689-6,656,993 | + | C2H2g27091 | CX2g023835 | LOC_Os02g13260 | Os02g0225900 | - | Detail |
| C1H2g29684 | 2:6,659,123-6,661,703 | - | C2H2g12882 | CX2g021885 | LOC_Os02g13270 | Os02g0226000 | - | Detail |
| C1H2g14093 | 2:6,676,199-6,677,173 | + | C2H2g26955 | CX2g021042 | LOC_Os02g13290 | Os02g0226200 | - | Detail |
| C1H2g01064 | 2:6,680,645-6,685,693 | + | C2H2g12216 | CX2g021388 | LOC_Os02g13300 | Os02g0226300 | - | Detail |
| C1H2g16170 | 2:6,686,424-6,687,398 | - | - | CX2g024662 | - | Os02g0226400 | - | Detail |
| C1H2g30402 | 2:6,695,214-6,697,708 | + | C2H2g15932 | CX2g020162 | LOC_Os02g13310 | Os02g0226600 | - | Detail |
| C1H2g00689 | 2:6,709,101-6,709,739 | - | C2H2g08544 | CX2g022029 | LOC_Os02g13330 | Os02g0226801 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |