| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18541 | 2:5,039,881-5,040,354 | + | - | - | - | - | - | Detail |
| C1H2g31286 | 2:5,040,372-5,040,986 | + | - | - | - | - | - | Detail |
| C1H2g00925 | 2:5,041,608-5,048,296 | - | C2H2g04941 | CX2g024056 | LOC_Os02g10490 | Os02g0198400 | - | Detail |
| C1H2g06425 | 2:5,050,007-5,050,270 | - | - | CX2g021702 | LOC_Os02g10500 | Os02g0198500 | - | Detail |
| C1H2g10529 | 2:5,053,776-5,058,508 | + | C2H2g15807 | CX2g019345 | LOC_Os02g10510 | Os02g0198600 | - | Detail |
| C1H2g05539 | 2:5,059,320-5,066,243 | - | C2H2g25569 | CX2g023458 | LOC_Os02g10520 | Os02g0198700 | - | Detail |
| C1H2g18429 | 2:5,077,201-5,078,181 | + | - | CX2g023785 | LOC_Os02g10530 | Os02g0198800 | - | Detail |
| C1H2g08158 | 2:5,079,232-5,079,813 | - | C2H2g18783 | CX2g022114 | LOC_Os02g10540 | Os02g0198900 | - | Detail |
| C1H2g29768 | 2:5,093,201-5,094,748 | + | C2H2g10818 | CX2g020000 | LOC_Os02g10580 | Os02g0199200 | - | Detail |
| C1H2g24423 | 2:5,095,294-5,096,785 | - | C2H2g11987 | CX2g023351 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| C1H2g30492 | 2:5,100,902-5,103,800 | + | C2H2g02789 | CX2g022696 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| C1H2g18635 | 2:5,104,372-5,105,673 | - | C2H2g20503 | CX2g024334 | - | Os02g0199600 | - | Detail |
| C1H2g14720 | 2:5,117,529-5,123,859 | - | C2H2g05452 | CX2g019312 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| C1H2g22079 | 2:5,125,666-5,131,128 | - | C2H2g30668 | CX2g022777 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| C1H2g00290 | 2:5,135,642-5,140,505 | + | C2H2g20119 | CX2g019933 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| C1H2g01509 | 2:5,140,801-5,145,139 | - | C2H2g08800 | CX2g023120 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| C1H2g22046 | 2:5,149,757-5,153,574 | + | C2H2g20788 | CX2g024181 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| C1H2g10608 | 2:5,154,481-5,157,791 | - | C2H2g24738 | CX2g023893 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| C1H2g13038 | 2:5,168,218-5,169,434 | - | C2H2g10447 | CX2g018996 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| C1H2g25618 | 2:5,170,069-5,173,804 | - | C2H2g27059 | CX2g021219 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |