| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29640 | 2:1,654,402-1,655,031 | + | C2H2g11013 | CX2g020909 | LOC_Os02g04110 | Os02g0133900 | - | Detail |
| C1H2g27754 | 2:1,655,403-1,656,638 | + | C2H2g11013 | CX2g020909 | LOC_Os02g04110 | Os02g0133900 | - | Detail |
| C1H2g30540 | 2:1,659,542-1,660,340 | + | C2H2g11489 | - | LOC_Os02g04120 | - | - | Detail |
| C1H2g07358 | 2:1,661,301-1,662,954 | + | C2H2g11489 | CX2g022919 | LOC_Os02g04120 | Os02g0134000 | - | Detail |
| C1H2g13453 | 2:1,666,077-1,666,823 | - | C2H2g26584 | CX2g022378 | LOC_Os02g04130 | Os02g0134200 | OsSGL | Detail |
| C1H2g14361 | 2:1,671,264-1,672,528 | - | C2H2g05912 | CX2g019612 | LOC_Os02g04160 | Os02g0134300 | - | Detail |
| C1H2g12220 | 2:1,677,846-1,681,553 | + | C2H2g07293 | CX2g020443 | LOC_Os02g04170 | Os02g0134400 | - | Detail |
| C1H2g18448 | 2:1,682,439-1,684,912 | - | C2H2g22848 | CX2g019744 | LOC_Os02g04180 | Os02g0134500 | - | Detail |
| C1H2g26298 | 2:1,696,573-1,697,412 | - | C2H2g00484 | CX2g022719 | LOC_Os02g04190 | Os02g0134700 | - | Detail |
| C1H2g19668 | 2:1,698,999-1,699,295 | + | C2H2g02614 | CX2g020844 | LOC_Os02g04210 | Os02g0135000 | - | Detail |
| C1H2g26978 | 2:1,701,828-1,709,645 | - | C2H2g04317 | CX2g023797 | LOC_Os02g04230 | Os02g0135200 | OsBIMK2 | Detail |
| C1H2g24774 | 2:1,710,711-1,714,619 | - | C2H2g19192 | CX2g021229 | LOC_Os02g04240 | Os02g0135300 | WEE1 | Detail |
| C1H2g14128 | 2:1,719,591-1,721,763 | + | C2H2g25822 | CX2g019699 | LOC_Os02g04250 | Os02g0135500 | OsXAT5 | Detail |
| C1H2g13357 | 2:1,725,817-1,729,304 | - | C2H2g13436 | CX2g020779 | LOC_Os02g04260 | Os02g0135600 | - | Detail |
| C1H2g17615 | 2:1,729,471-1,735,774 | + | C2H2g01520 | CX2g022110 | LOC_Os02g04270 | Os02g0135700 | - | Detail |
| C1H2g06633 | 2:1,737,503-1,738,420 | + | - | CX2g019401 | LOC_Os02g04320 | Os02g0135800 | - | Detail |
| C1H2g02365 | 2:1,741,002-1,741,616 | + | C2H2g19081 | CX2g020618 | LOC_Os02g04325 | Os02g0135850 | - | Detail |
| C1H2g08602 | 2:1,742,730-1,746,553 | + | C2H2g01021 | CX2g019788 | LOC_Os02g04330 | Os02g0135900 | - | Detail |
| C1H2g01310 | 2:1,743,951-1,748,888 | - | C2H2g22991 | CX2g022371 | LOC_Os02g04340 | Os02g0136000 | - | Detail |
| C1H2g17494 | 2:1,748,986-1,749,912 | - | C2H2g20405 | CX2g022371 | LOC_Os02g04340 | Os02g0136000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031169 | 3:28,342,530-28,343,063 | - | C1H3g22167 | C2H3g23317 | LOC_Os03g56130 | Os03g0246100 | - | Detail |
| CX3g025820 | 3:28,345,076-28,349,100 | + | C1H3g18700 | C2H3g04382 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| CX3g026634 | 3:28,353,249-28,355,828 | - | C1H3g06923 | C2H3g27223 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| CX3g025574 | 3:28,361,919-28,371,472 | + | C1H3g13520 | C2H3g08831 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| CX3g026366 | 3:28,372,307-28,375,186 | - | C1H3g22442 | C2H3g00418 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| CX3g026865 | 3:28,375,432-28,378,688 | + | C1H3g19238 | C2H3g24375 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| CX3g029345 | 3:28,375,788-28,376,377 | - | - | - | - | Os03g0738101 | - | Detail |
| CX3g030189 | 3:28,379,882-28,395,855 | + | C1H3g14512 | C2H3g01060 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| CX3g026362 | 3:28,400,555-28,404,513 | + | C1H3g21044 | C2H3g05635 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| CX3g025013 | 3:28,419,841-28,423,099 | + | C1H3g07947 | C2H3g05845 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| CX3g030893 | 3:28,430,129-28,432,342 | + | C1H3g24267 | C2H3g02923 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| CX3g028113 | 3:28,441,792-28,443,294 | + | C1H3g14490 | C2H3g01404 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| CX3g026229 | 3:28,444,838-28,445,461 | - | - | - | LOC_Os03g52920 | - | - | Detail |
| CX3g027326 | 3:28,464,379-28,464,885 | + | - | - | LOC_Os03g52940 | Os03g0740200 | - | Detail |
| CX3g030701 | 3:28,468,370-28,468,588 | + | - | - | - | - | - | Detail |
| CX3g026120 | 3:28,473,220-28,476,815 | + | C1H3g22532 | C2H3g15580 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| CX3g027471 | 3:28,478,074-28,482,525 | + | C1H3g30167 | C2H3g17064 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| CX3g027476 | 3:28,486,803-28,489,331 | + | C1H3g01871 | C2H3g00686 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| CX3g029988 | 3:28,500,256-28,502,456 | + | C1H3g08757 | C2H3g06591 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| CX3g029674 | 3:28,517,223-28,519,108 | + | C1H3g07900 | C2H3g29971 | LOC_Os03g53050 | Os03g0741400 | - | Detail |