| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g23844 | 5:860,604-861,531 | + | C1H5g04400 | CX5g039032 | LOC_Os05g02730 | Os05g0118700 | LSY1, OsWOX3 | Detail |
| C2H5g12416 | 5:879,289-881,285 | + | - | CX5g039138 | LOC_Os05g02740 | Os05g0118800 | - | Detail |
| C2H5g07908 | 5:890,481-891,241 | - | C1H5g07583 | CX5g037492 | LOC_Os05g02770 | Os05g0119200 | OsGPRP3 | Detail |
| C2H5g12083 | 5:893,287-895,434 | - | C1H5g14848 | CX5g036862 | LOC_Os05g02780 | - | - | Detail |
| C2H5g19310 | 5:895,991-900,450 | + | C1H5g27829 | - | - | Os05g0119350 | - | Detail |
| C2H5g27633 | 5:896,625-900,818 | - | C1H5g12144 | CX5g038855 | LOC_Os05g02790 | Os05g0119400 | - | Detail |
| C2H5g28586 | 5:902,862-904,767 | + | C1H5g31502 | CX5g039714 | LOC_Os05g02810 | Os05g0119600 | - | Detail |
| C2H5g20475 | 5:906,134-910,098 | - | C1H5g05932 | CX5g039871 | LOC_Os05g02820 | Os05g0119700 | - | Detail |
| C2H5g16207 | 5:914,588-915,130 | + | - | CX5g040523 | - | - | - | Detail |
| C2H5g27318 | 5:924,283-926,397 | - | C1H5g25594 | CX5g040974 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| C2H5g09848 | 5:958,894-964,680 | + | C1H5g31585 | CX5g037865 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| C2H5g03610 | 5:968,282-969,866 | + | C1H5g20255 | CX5g040092 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| C2H5g24004 | 5:980,610-982,014 | + | C1H5g25679 | CX5g038448 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| C2H5g03745 | 5:983,992-993,664 | + | C1H5g01702 | CX5g038251 | - | Os05g0121100 | - | Detail |
| C2H5g13518 | 5:995,632-999,842 | - | C1H5g21915 | CX5g038381 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| C2H5g27724 | 5:1,001,134-1,006,398 | + | C1H5g23502 | CX5g037956 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| C2H5g29033 | 5:1,014,404-1,018,718 | - | C1H5g18884 | CX5g038220 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g03539 | 5:1,049,068-1,053,189 | - | C1H5g22491 | CX5g039481 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| C2H5g07687 | 5:1,059,397-1,063,439 | + | C1H5g25689 | CX5g038840 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| C2H5g05750 | 5:1,063,498-1,065,255 | - | C1H5g18041 | CX5g041093 | LOC_Os05g03070 | Os05g0121900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025429 | 3:28,233,977-28,238,180 | - | C1H3g23948 | C2H3g18785 | LOC_Os03g52430 | Os03g0734700 | - | Detail |
| CX3g025463 | 3:28,242,605-28,247,164 | - | C1H3g00521 | C2H3g00406 | LOC_Os03g52450 | Os03g0734900 | - | Detail |
| CX3g028629 | 3:28,247,823-28,252,230 | - | C1H3g04061 | C2H3g22726 | LOC_Os03g52460 | Os03g0735000 | - | Detail |
| CX3g025816 | 3:28,255,272-28,259,666 | + | C1H3g23423 | C2H3g20865 | LOC_Os03g52470 | Os03g0735100 | - | Detail |
| CX3g029339 | 3:28,260,752-28,261,995 | - | C1H3g22763 | C2H3g09114 | LOC_Os03g52475 | Os03g0735200 | - | Detail |
| CX3g030925 | 3:28,265,847-28,268,951 | - | C1H3g28384 | C2H3g10977 | LOC_Os03g52490 | Os03g0735300 | - | Detail |
| CX3g030643 | 3:28,273,898-28,276,540 | + | C1H3g06992 | C2H3g04119 | LOC_Os03g52560 | Os03g0735800 | - | Detail |
| CX3g029619 | 3:28,277,067-28,278,989 | - | C1H3g28253 | C2H3g00875 | LOC_Os03g52570 | Os03g0735900 | OsRAM2 | Detail |
| CX3g030559 | 3:28,281,770-28,288,361 | - | C1H3g25411 | C2H3g10556 | LOC_Os03g52594 | Os03g0736000 | - | Detail |
| CX3g025823 | 3:28,292,990-28,294,210 | + | C1H3g22504 | C2H3g24120 | LOC_Os03g52620 | Os03g0736200 | - | Detail |
| CX3g028973 | 3:28,295,485-28,298,321 | - | C1H3g23470 | C2H3g21608 | LOC_Os03g52630 | Os03g0736300 | - | Detail |
| CX3g029628 | 3:28,302,485-28,305,262 | - | C1H3g16767 | C2H3g15503 | LOC_Os03g52640 | Os03g0736400 | - | Detail |
| CX3g026452 | 3:28,306,930-28,310,544 | + | C1H3g06383 | C2H3g14297 | LOC_Os03g52650 | Os03g0736500 | - | Detail |
| CX3g030782 | 3:28,311,338-28,312,381 | - | C1H3g27539 | C2H3g25472 | LOC_Os03g52670 | Os03g0736700 | - | Detail |
| CX3g031141 | 3:28,315,188-28,315,943 | + | - | - | LOC_Os03g52680 | Os03g0736900 | - | Detail |
| CX3g027234 | 3:28,316,356-28,316,601 | - | - | - | - | - | - | Detail |
| CX3g030023 | 3:28,318,341-28,319,753 | - | C1H3g22100 | C2H3g06997 | LOC_Os03g52690 | Os03g0737000 | - | Detail |
| CX3g025215 | 3:28,321,086-28,321,301 | - | - | - | - | - | - | Detail |
| CX3g030091 | 3:28,326,508-28,334,280 | - | C1H3g13284 | C2H3g03773 | LOC_Os03g52700 | Os03g0737200 | OsHOS1 | Detail |
| CX3g030361 | 3:28,335,246-28,342,202 | - | C1H3g28619 | C2H3g06862 | LOC_Os03g52720 | Os03g0737300 | - | Detail |