| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06427 | 5:2,991,615-2,997,443 | + | C2H5g19140 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| C1H5g15255 | 5:3,003,341-3,016,934 | + | C2H5g13429 | CX5g040180 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| C1H5g29215 | 5:3,020,866-3,023,528 | + | C2H5g10674 | CX5g036830 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| C1H5g24999 | 5:3,024,303-3,028,380 | - | C2H5g18018 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C1H5g19191 | 5:3,030,462-3,037,921 | - | C2H5g19257 | CX5g037735 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| C1H5g26427 | 5:3,057,170-3,060,791 | + | C2H5g24095 | CX5g036773 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| C1H5g22506 | 5:3,062,176-3,065,516 | + | C2H5g30095 | CX5g040221 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| C1H5g10936 | 5:3,070,796-3,071,813 | - | C2H5g06168 | CX5g038772 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| C1H5g01032 | 5:3,079,237-3,086,416 | + | C2H5g24726 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g16939 | 5:3,114,826-3,119,380 | - | C2H5g04837 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g08386 | 5:3,121,261-3,124,469 | - | C2H5g14563 | CX5g038917 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| C1H5g11456 | 5:3,134,137-3,138,736 | + | C2H5g12914 | CX5g036690 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| C1H5g17757 | 5:3,148,121-3,151,561 | + | C2H5g20736 | - | LOC_Os05g06890 | Os05g0161200 | OsCRSH1 | Detail |
| C1H5g28932 | 5:3,156,121-3,159,136 | + | C2H5g07576 | CX5g039426 | LOC_Os05g06910 | Os05g0161400 | - | Detail |
| C1H5g14109 | 5:3,169,114-3,169,720 | + | - | - | - | - | - | Detail |
| C1H5g24444 | 5:3,170,545-3,173,020 | + | C2H5g24440 | - | LOC_Os05g06920 | Os05g0161500 | OsCRSH2 | Detail |
| C1H5g10245 | 5:3,182,963-3,185,281 | + | C2H5g21538 | - | LOC_Os05g06940 | Os05g0161800 | OsCRSH3 | Detail |
| C1H5g04552 | 5:3,194,365-3,196,462 | - | C2H5g10505 | CX5g038822 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| C1H5g19592 | 5:3,201,093-3,211,946 | - | C2H5g18624 | CX5g040374 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| C1H5g00882 | 5:3,225,916-3,228,865 | - | C2H5g07564 | CX5g040436 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025429 | 3:28,233,977-28,238,180 | - | C1H3g23948 | C2H3g18785 | LOC_Os03g52430 | Os03g0734700 | - | Detail |
| CX3g025463 | 3:28,242,605-28,247,164 | - | C1H3g00521 | C2H3g00406 | LOC_Os03g52450 | Os03g0734900 | - | Detail |
| CX3g028629 | 3:28,247,823-28,252,230 | - | C1H3g04061 | C2H3g22726 | LOC_Os03g52460 | Os03g0735000 | - | Detail |
| CX3g025816 | 3:28,255,272-28,259,666 | + | C1H3g23423 | C2H3g20865 | LOC_Os03g52470 | Os03g0735100 | - | Detail |
| CX3g029339 | 3:28,260,752-28,261,995 | - | C1H3g22763 | C2H3g09114 | LOC_Os03g52475 | Os03g0735200 | - | Detail |
| CX3g030925 | 3:28,265,847-28,268,951 | - | C1H3g28384 | C2H3g10977 | LOC_Os03g52490 | Os03g0735300 | - | Detail |
| CX3g030643 | 3:28,273,898-28,276,540 | + | C1H3g06992 | C2H3g04119 | LOC_Os03g52560 | Os03g0735800 | - | Detail |
| CX3g029619 | 3:28,277,067-28,278,989 | - | C1H3g28253 | C2H3g00875 | LOC_Os03g52570 | Os03g0735900 | OsRAM2 | Detail |
| CX3g030559 | 3:28,281,770-28,288,361 | - | C1H3g25411 | C2H3g10556 | LOC_Os03g52594 | Os03g0736000 | - | Detail |
| CX3g025823 | 3:28,292,990-28,294,210 | + | C1H3g22504 | C2H3g24120 | LOC_Os03g52620 | Os03g0736200 | - | Detail |
| CX3g028973 | 3:28,295,485-28,298,321 | - | C1H3g23470 | C2H3g21608 | LOC_Os03g52630 | Os03g0736300 | - | Detail |
| CX3g029628 | 3:28,302,485-28,305,262 | - | C1H3g16767 | C2H3g15503 | LOC_Os03g52640 | Os03g0736400 | - | Detail |
| CX3g026452 | 3:28,306,930-28,310,544 | + | C1H3g06383 | C2H3g14297 | LOC_Os03g52650 | Os03g0736500 | - | Detail |
| CX3g030782 | 3:28,311,338-28,312,381 | - | C1H3g27539 | C2H3g25472 | LOC_Os03g52670 | Os03g0736700 | - | Detail |
| CX3g031141 | 3:28,315,188-28,315,943 | + | - | - | LOC_Os03g52680 | Os03g0736900 | - | Detail |
| CX3g027234 | 3:28,316,356-28,316,601 | - | - | - | - | - | - | Detail |
| CX3g030023 | 3:28,318,341-28,319,753 | - | C1H3g22100 | C2H3g06997 | LOC_Os03g52690 | Os03g0737000 | - | Detail |
| CX3g025215 | 3:28,321,086-28,321,301 | - | - | - | - | - | - | Detail |
| CX3g030091 | 3:28,326,508-28,334,280 | - | C1H3g13284 | C2H3g03773 | LOC_Os03g52700 | Os03g0737200 | OsHOS1 | Detail |
| CX3g030361 | 3:28,335,246-28,342,202 | - | C1H3g28619 | C2H3g06862 | LOC_Os03g52720 | Os03g0737300 | - | Detail |