| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17042 | 4:20,797,046-20,800,398 | - | C1H4g31403 | CX4g036343 | LOC_Os04g40650 | Os04g0482700 | - | Detail |
| C2H4g09234 | 4:20,801,204-20,805,683 | - | C1H4g18067 | CX4g032655 | LOC_Os04g40660 | Os04g0482800 | - | Detail |
| C2H4g06345 | 4:20,806,844-20,811,942 | - | C1H4g04900 | CX4g032113 | LOC_Os04g40670 | Os04g0482900 | - | Detail |
| C2H4g21173 | 4:20,815,477-20,817,018 | + | C1H4g26441 | CX4g035699 | LOC_Os04g40680 | Os04g0483000 | - | Detail |
| C2H4g26991 | 4:20,827,642-20,832,109 | + | C1H4g10284 | CX4g036074 | LOC_Os04g40700 | Os04g0483200 | - | Detail |
| C2H4g13170 | 4:20,832,265-20,838,730 | - | C1H4g11147 | CX4g035331 | LOC_Os04g40720 | Os04g0483400 | OsSUBSrP1 | Detail |
| C2H4g15487 | 4:20,840,358-20,843,372 | - | C1H4g14843 | CX4g031522 | LOC_Os04g40730 | Os04g0483500 | KCR1, OsKCR1, WSL3 | Detail |
| C2H4g03640 | 4:20,845,395-20,852,309 | - | C1H4g00579 | CX4g033297 | LOC_Os04g40740 | Os04g0483600 | - | Detail |
| C2H4g28314 | 4:20,861,023-20,862,867 | - | C1H4g22602 | CX4g032598 | LOC_Os04g40760 | Os04g0651600 | - | Detail |
| C2H4g03392 | 4:20,871,565-20,879,184 | + | C1H4g19344 | CX4g034516 | LOC_Os04g40830 | Os04g0484800 | - | Detail |
| C2H4g06907 | 4:20,879,589-20,882,951 | - | C1H4g05361 | CX4g032355 | LOC_Os04g40840 | Os04g0484900 | OsELP3 | Detail |
| C2H4g29472 | 4:20,883,277-20,885,991 | + | C1H4g09149 | CX4g035127 | LOC_Os04g40850 | Os04g0485000 | OsRpn7 | Detail |
| C2H4g14931 | 4:20,886,151-20,890,107 | - | C1H4g21128 | CX4g034685 | LOC_Os04g40860 | Os04g0485100 | - | Detail |
| C2H4g07215 | 4:20,894,500-20,897,610 | + | C1H4g16250 | CX4g032126 | LOC_Os04g40870 | Os04g0485200 | - | Detail |
| C2H4g19727 | 4:20,901,679-20,907,974 | + | C1H4g02206 | CX4g032384 | LOC_Os04g40874 | Os04g0485300 | - | Detail |
| C2H4g08090 | 4:20,902,491-20,910,357 | - | C1H4g05914 | CX4g033307 | LOC_Os04g40880 | Os04g0485400 | - | Detail |
| C2H4g07501 | 4:20,911,718-20,913,987 | + | C1H8g13693 | CX4g032119 | LOC_Os04g40900 | Os04g0485700 | - | Detail |
| C2H4g25528 | 4:20,915,296-20,918,861 | - | C1H4g23020 | CX4g031550 | LOC_Os04g40910 | Os04g0485800 | - | Detail |
| C2H4g07670 | 4:20,925,719-20,927,142 | + | C1H4g01634 | CX4g034598 | LOC_Os04g40920 | Os04g0486300 | - | Detail |
| C2H4g08395 | 4:20,928,040-20,932,453 | + | C1H4g05039 | CX4g034598 | LOC_Os04g40930 | Os04g0486400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027975 | 3:28,099,957-28,100,981 | + | C1H3g13296 | C2H3g14888 | LOC_Os03g52130 | Os03g0731100 | - | Detail |
| CX3g025070 | 3:28,104,677-28,104,850 | - | - | - | - | - | - | Detail |
| CX3g026280 | 3:28,106,083-28,115,138 | + | C1H3g30965 | C2H3g15813 | LOC_Os03g52150 | Os03g0731500 | - | Detail |
| CX3g025632 | 3:28,115,983-28,117,538 | + | C1H3g29781 | C2H3g18334 | LOC_Os03g52160 | Os03g0731800 | - | Detail |
| CX3g027993 | 3:28,118,069-28,120,812 | - | C1H3g24484 | C2H3g17469 | LOC_Os03g52170 | Os03g0731900 | OsHMBPP, LAS1, LAS1/OsHMBPP | Detail |
| CX3g028410 | 3:28,124,189-28,128,180 | - | C1H3g05748 | C2H3g17794 | LOC_Os03g52180 | Os03g0732000 | OsIspH2 | Detail |
| CX3g027773 | 3:28,150,190-28,159,743 | + | C1H3g07434 | C2H3g20028 | LOC_Os03g52239 | Os03g0732100 | ROSES1 | Detail |
| CX3g028256 | 3:28,165,372-28,165,539 | - | - | - | - | - | - | Detail |
| CX3g025156 | 3:28,169,139-28,170,532 | - | C1H3g11344 | C2H3g11203 | LOC_Os03g52280 | Os03g0733000 | - | Detail |
| CX3g026275 | 3:28,173,683-28,173,940 | - | - | - | LOC_Os03g52284 | - | - | Detail |
| CX3g029612 | 3:28,176,796-28,177,503 | - | C1H3g20712 | C2H3g09547 | LOC_Os03g52290 | Os03g0811550 | - | Detail |
| CX3g031129 | 3:28,178,497-28,179,027 | - | - | C2H3g25225 | LOC_Os03g52300 | - | - | Detail |
| CX3g026785 | 3:28,182,224-28,184,362 | - | C1H3g21763 | C2H3g04619 | LOC_Os03g52310 | Os03g0733400 | - | Detail |
| CX3g025961 | 3:28,188,564-28,191,899 | - | C1H3g23506 | C2H3g09605 | LOC_Os03g52320 | Os03g0733600 | OsGIF1, MKB3 | Detail |
| CX3g025745 | 3:28,208,248-28,212,930 | - | C1H3g05494 | C2H3g27141 | LOC_Os03g52340 | Os03g0733800 | OsERO1, OsEro1 | Detail |
| CX3g030687 | 3:28,218,783-28,219,147 | + | C1H3g23554 | C2H3g09869 | LOC_Os03g52360 | Os03g0734000 | - | Detail |
| CX3g025126 | 3:28,222,637-28,223,011 | + | C1H3g05445 | C2H3g10253 | LOC_Os03g52370 | Os03g0734100 | - | Detail |
| CX3g030269 | 3:28,223,946-28,224,325 | + | C1H3g04075 | C2H3g03601 | LOC_Os03g52380 | Os03g0734200 | - | Detail |
| CX3g028713 | 3:28,225,781-28,226,129 | + | C1H3g13317 | C2H3g04628 | LOC_Os03g52390 | Os03g0734300 | - | Detail |
| CX3g031090 | 3:28,228,288-28,228,806 | - | - | - | LOC_Os03g52400 | Os03g0734400 | - | Detail |