| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g15716 | 4:13,201,285-13,204,387 | - | C1H4g03787 | CX4g031567 | LOC_Os04g25570 | Os04g0321800 | - | Detail |
| C2H4g26903 | 4:13,378,381-13,378,698 | + | C1H4g31637 | CX4g034246 | - | Os04g0336700 | - | Detail |
| C2H4g15129 | 4:13,384,393-13,384,955 | - | C1H4g03180 | CX4g033284 | LOC_Os04g26790 | Os04g0336600 | - | Detail |
| C2H4g22692 | 4:13,388,143-13,394,174 | - | C1H4g28418 | CX4g033284 | LOC_Os04g26790 | Os04g0336600 | - | Detail |
| C2H4g17804 | 4:13,421,213-13,430,339 | - | C1H4g14114 | CX4g033284 | LOC_Os04g26834 | Os04g0337000 | - | Detail |
| C2H4g18381 | 4:13,441,368-13,456,566 | + | C1H4g19182 | CX4g031766 | LOC_Os04g26850 | Os04g0337300 | - | Detail |
| C2H4g01340 | 4:13,465,953-13,473,349 | + | C1H4g07832 | CX4g036366 | LOC_Os04g26870 | Os04g0337500 | - | Detail |
| C2H4g17077 | 4:13,479,255-13,481,826 | + | C1H4g28393 | CX4g036366 | LOC_Os04g26920 | Os04g0337800 | - | Detail |
| C2H4g25762 | 4:13,485,056-13,485,751 | + | C1H4g19562 | CX4g035559 | LOC_Os04g27060 | Os04g0337800 | - | Detail |
| C2H4g03837 | 4:13,487,747-13,491,049 | + | C1H4g14004 | CX4g035559 | LOC_Os04g26910 | Os04g0338000 | - | Detail |
| C2H4g15649 | 4:13,512,572-13,516,730 | + | C1H4g28393 | CX4g035559 | LOC_Os04g26920 | Os04g0338000 | - | Detail |
| C2H4g09932 | 4:13,525,528-13,526,049 | - | - | - | LOC_Os04g26930 | - | - | Detail |
| C2H4g16526 | 4:13,537,103-13,537,419 | - | C1H8g04458 | CX4g034901 | - | - | - | Detail |
| C2H4g14050 | 4:13,544,058-13,545,822 | + | C1H4g23322 | CX4g036012 | LOC_Os04g26960 | Os04g0344100 | - | Detail |
| C2H4g16024 | 4:13,547,818-13,549,010 | + | C1H4g09628 | CX4g036012 | LOC_Os04g26960 | Os04g0344100 | - | Detail |
| C2H4g12078 | 4:13,588,283-13,588,705 | + | C1H4g07892 | - | - | - | - | Detail |
| C2H4g03238 | 4:13,592,755-13,592,988 | + | - | - | - | - | - | Detail |
| C2H4g17478 | 4:13,595,885-13,598,944 | + | C1H4g29227 | CX4g035619 | LOC_Os04g27020 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g26112 | 4:13,606,381-13,610,165 | + | C1H4g26057 | CX4g032815 | LOC_Os04g27060 | Os04g0339400 | OsAKR1 | Detail |
| C2H4g17594 | 4:13,612,409-13,618,173 | - | C1H4g31520 | CX4g031945 | LOC_Os04g27070 | Os04g0344100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027975 | 3:28,099,957-28,100,981 | + | C1H3g13296 | C2H3g14888 | LOC_Os03g52130 | Os03g0731100 | - | Detail |
| CX3g025070 | 3:28,104,677-28,104,850 | - | - | - | - | - | - | Detail |
| CX3g026280 | 3:28,106,083-28,115,138 | + | C1H3g30965 | C2H3g15813 | LOC_Os03g52150 | Os03g0731500 | - | Detail |
| CX3g025632 | 3:28,115,983-28,117,538 | + | C1H3g29781 | C2H3g18334 | LOC_Os03g52160 | Os03g0731800 | - | Detail |
| CX3g027993 | 3:28,118,069-28,120,812 | - | C1H3g24484 | C2H3g17469 | LOC_Os03g52170 | Os03g0731900 | OsHMBPP, LAS1, LAS1/OsHMBPP | Detail |
| CX3g028410 | 3:28,124,189-28,128,180 | - | C1H3g05748 | C2H3g17794 | LOC_Os03g52180 | Os03g0732000 | OsIspH2 | Detail |
| CX3g027773 | 3:28,150,190-28,159,743 | + | C1H3g07434 | C2H3g20028 | LOC_Os03g52239 | Os03g0732100 | ROSES1 | Detail |
| CX3g028256 | 3:28,165,372-28,165,539 | - | - | - | - | - | - | Detail |
| CX3g025156 | 3:28,169,139-28,170,532 | - | C1H3g11344 | C2H3g11203 | LOC_Os03g52280 | Os03g0733000 | - | Detail |
| CX3g026275 | 3:28,173,683-28,173,940 | - | - | - | LOC_Os03g52284 | - | - | Detail |
| CX3g029612 | 3:28,176,796-28,177,503 | - | C1H3g20712 | C2H3g09547 | LOC_Os03g52290 | Os03g0811550 | - | Detail |
| CX3g031129 | 3:28,178,497-28,179,027 | - | - | C2H3g25225 | LOC_Os03g52300 | - | - | Detail |
| CX3g026785 | 3:28,182,224-28,184,362 | - | C1H3g21763 | C2H3g04619 | LOC_Os03g52310 | Os03g0733400 | - | Detail |
| CX3g025961 | 3:28,188,564-28,191,899 | - | C1H3g23506 | C2H3g09605 | LOC_Os03g52320 | Os03g0733600 | OsGIF1, MKB3 | Detail |
| CX3g025745 | 3:28,208,248-28,212,930 | - | C1H3g05494 | C2H3g27141 | LOC_Os03g52340 | Os03g0733800 | OsERO1, OsEro1 | Detail |
| CX3g030687 | 3:28,218,783-28,219,147 | + | C1H3g23554 | C2H3g09869 | LOC_Os03g52360 | Os03g0734000 | - | Detail |
| CX3g025126 | 3:28,222,637-28,223,011 | + | C1H3g05445 | C2H3g10253 | LOC_Os03g52370 | Os03g0734100 | - | Detail |
| CX3g030269 | 3:28,223,946-28,224,325 | + | C1H3g04075 | C2H3g03601 | LOC_Os03g52380 | Os03g0734200 | - | Detail |
| CX3g028713 | 3:28,225,781-28,226,129 | + | C1H3g13317 | C2H3g04628 | LOC_Os03g52390 | Os03g0734300 | - | Detail |
| CX3g031090 | 3:28,228,288-28,228,806 | - | - | - | LOC_Os03g52400 | Os03g0734400 | - | Detail |