| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24528 | 2:32,368,038-32,371,612 | - | C1H2g20704 | - | - | - | - | Detail |
| C2H2g16616 | 2:32,395,053-32,396,749 | + | C1H2g05731 | - | LOC_Os02g58050 | - | - | Detail |
| C2H2g18185 | 2:32,402,650-32,404,781 | + | C1H2g13111 | CX2g019486 | LOC_Os02g58070 | - | - | Detail |
| C2H2g14679 | 2:32,406,125-32,410,837 | + | C1H2g01779 | CX2g024299 | LOC_Os02g58080 | Os02g0576600 | OsSUT5Z, OsSUT5 | Detail |
| C2H2g12823 | 2:32,411,370-32,416,448 | + | C1H2g14203 | CX2g021389 | LOC_Os02g58090 | Os02g0827300 | - | Detail |
| C2H2g07859 | 2:32,417,177-32,418,740 | + | C1H2g17767 | CX2g020312 | LOC_Os02g58100 | Os02g0827400 | - | Detail |
| C2H2g08276 | 2:32,420,230-32,425,253 | + | C1H2g25555 | CX2g020655 | LOC_Os02g58110 | Os02g0827500 | - | Detail |
| C2H2g01186 | 2:32,425,713-32,428,063 | - | C1H2g25769 | CX2g024804 | LOC_Os02g58120 | Os02g0827600 | - | Detail |
| C2H2g13358 | 2:32,428,318-32,431,662 | - | C1H2g25769 | CX2g021298 | LOC_Os02g57800 | Os02g0824000 | - | Detail |
| C2H2g14142 | 2:32,432,205-32,434,272 | - | - | CX2g019001 | LOC_Os02g58139 | Os02g0827900 | - | Detail |
| C2H2g22309 | 2:32,434,966-32,438,335 | - | C1H2g29575 | CX2g020130 | LOC_Os02g58160 | Os02g0828100 | - | Detail |
| C2H2g24086 | 2:32,440,314-32,442,421 | + | C1H2g09988 | CX2g022711 | LOC_Os02g58150 | Os02g0828200 | - | Detail |
| C2H2g01735 | 2:32,446,072-32,447,331 | + | C1H2g12011 | CX2g024386 | LOC_Os02g58170 | Os02g0828500 | - | Detail |
| C2H2g29730 | 2:32,460,220-32,460,939 | - | - | CX2g024569 | LOC_Os02g42380 | Os02g0828566 | - | Detail |
| C2H2g19009 | 2:32,471,999-32,472,214 | - | - | CX2g020307 | LOC_Os02g58200 | Os02g0828800 | - | Detail |
| C2H2g21040 | 2:32,473,642-32,480,326 | + | C1H2g26132 | CX2g022618 | LOC_Os02g58210 | Os02g0828900 | - | Detail |
| C2H2g26830 | 2:32,491,864-32,494,243 | - | C1H2g13644 | CX2g022289 | LOC_Os02g58220 | Os02g0829100 | OsRPA2, OsRPA32 | Detail |
| C2H2g22612 | 2:32,497,332-32,502,477 | - | C1H2g17512 | CX2g024162 | LOC_Os02g58230 | Os02g0829200 | - | Detail |
| C2H2g08873 | 2:32,503,908-32,507,407 | + | C1H2g22040 | CX2g021877 | LOC_Os02g58250 | Os02g0829400 | - | Detail |
| C2H2g06590 | 2:32,508,068-32,510,687 | - | C1H2g19670 | CX2g020227 | LOC_Os02g58260 | Os02g0829500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027975 | 3:28,099,957-28,100,981 | + | C1H3g13296 | C2H3g14888 | LOC_Os03g52130 | Os03g0731100 | - | Detail |
| CX3g025070 | 3:28,104,677-28,104,850 | - | - | - | - | - | - | Detail |
| CX3g026280 | 3:28,106,083-28,115,138 | + | C1H3g30965 | C2H3g15813 | LOC_Os03g52150 | Os03g0731500 | - | Detail |
| CX3g025632 | 3:28,115,983-28,117,538 | + | C1H3g29781 | C2H3g18334 | LOC_Os03g52160 | Os03g0731800 | - | Detail |
| CX3g027993 | 3:28,118,069-28,120,812 | - | C1H3g24484 | C2H3g17469 | LOC_Os03g52170 | Os03g0731900 | OsHMBPP, LAS1, LAS1/OsHMBPP | Detail |
| CX3g028410 | 3:28,124,189-28,128,180 | - | C1H3g05748 | C2H3g17794 | LOC_Os03g52180 | Os03g0732000 | OsIspH2 | Detail |
| CX3g027773 | 3:28,150,190-28,159,743 | + | C1H3g07434 | C2H3g20028 | LOC_Os03g52239 | Os03g0732100 | ROSES1 | Detail |
| CX3g028256 | 3:28,165,372-28,165,539 | - | - | - | - | - | - | Detail |
| CX3g025156 | 3:28,169,139-28,170,532 | - | C1H3g11344 | C2H3g11203 | LOC_Os03g52280 | Os03g0733000 | - | Detail |
| CX3g026275 | 3:28,173,683-28,173,940 | - | - | - | LOC_Os03g52284 | - | - | Detail |
| CX3g029612 | 3:28,176,796-28,177,503 | - | C1H3g20712 | C2H3g09547 | LOC_Os03g52290 | Os03g0811550 | - | Detail |
| CX3g031129 | 3:28,178,497-28,179,027 | - | - | C2H3g25225 | LOC_Os03g52300 | - | - | Detail |
| CX3g026785 | 3:28,182,224-28,184,362 | - | C1H3g21763 | C2H3g04619 | LOC_Os03g52310 | Os03g0733400 | - | Detail |
| CX3g025961 | 3:28,188,564-28,191,899 | - | C1H3g23506 | C2H3g09605 | LOC_Os03g52320 | Os03g0733600 | OsGIF1, MKB3 | Detail |
| CX3g025745 | 3:28,208,248-28,212,930 | - | C1H3g05494 | C2H3g27141 | LOC_Os03g52340 | Os03g0733800 | OsERO1, OsEro1 | Detail |
| CX3g030687 | 3:28,218,783-28,219,147 | + | C1H3g23554 | C2H3g09869 | LOC_Os03g52360 | Os03g0734000 | - | Detail |
| CX3g025126 | 3:28,222,637-28,223,011 | + | C1H3g05445 | C2H3g10253 | LOC_Os03g52370 | Os03g0734100 | - | Detail |
| CX3g030269 | 3:28,223,946-28,224,325 | + | C1H3g04075 | C2H3g03601 | LOC_Os03g52380 | Os03g0734200 | - | Detail |
| CX3g028713 | 3:28,225,781-28,226,129 | + | C1H3g13317 | C2H3g04628 | LOC_Os03g52390 | Os03g0734300 | - | Detail |
| CX3g031090 | 3:28,228,288-28,228,806 | - | - | - | LOC_Os03g52400 | Os03g0734400 | - | Detail |