| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01731 | 6:22,938,721-22,951,042 | + | C1H6g20754 | CX6g045240 | LOC_Os06g43760 | Os06g0645400 | - | Detail |
| C2H6g19060 | 6:22,958,758-22,962,340 | - | C1H6g28289 | CX6g044887 | LOC_Os06g43780 | Os06g0645600 | - | Detail |
| C2H6g03809 | 6:22,963,538-22,977,258 | - | C1H6g09143 | CX6g044295 | LOC_Os06g43790 | Os06g0645700 | - | Detail |
| C2H6g16896 | 6:22,978,375-22,980,930 | - | C1H6g02577 | CX6g042731 | LOC_Os06g43800 | Os06g0646000 | - | Detail |
| C2H6g00144 | 6:23,007,540-23,013,374 | + | C1H6g04976 | CX6g042688 | LOC_Os06g43840 | Os06g0646400 | - | Detail |
| C2H6g05559 | 6:23,017,922-23,020,338 | + | C1H6g25984 | CX6g045272 | LOC_Os06g43850 | Os06g0646500 | - | Detail |
| C2H6g16940 | 6:23,021,857-23,024,477 | - | C1H6g26077 | CX6g045626 | LOC_Os06g43860 | Os06g0646600 | HOS59, HOS59S | Detail |
| C2H6g02597 | 6:23,031,532-23,035,222 | - | C1H6g19436 | CX6g045351 | LOC_Os06g43870 | - | - | Detail |
| C2H6g24337 | 6:23,045,473-23,048,768 | - | C1H6g29846 | CX6g042928 | LOC_Os06g43880 | Os06g0646900 | OsHGGT | Detail |
| C2H6g29125 | 6:23,052,328-23,054,115 | + | C1H6g00877 | CX6g042487 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| C2H6g13204 | 6:23,060,189-23,064,493 | + | C1H6g08065 | CX6g041230 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| C2H6g09236 | 6:23,064,769-23,070,371 | - | C1H6g31723 | CX6g041258 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| C2H6g29946 | 6:23,099,382-23,101,931 | - | C1H6g19263 | CX6g043868 | LOC_Os06g43980 | - | - | Detail |
| C2H6g15797 | 6:23,105,916-23,107,291 | - | C1H6g04314 | CX6g041862 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| C2H6g19123 | 6:23,116,876-23,119,310 | + | C1H6g02827 | CX6g043505 | - | Os06g0531600 | - | Detail |
| C2H6g25130 | 6:23,126,596-23,127,989 | - | C1H6g19092 | CX6g041428 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| C2H6g09048 | 6:23,143,335-23,152,171 | + | C1H6g01999 | CX6g042578 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| C2H6g02564 | 6:23,178,530-23,182,815 | + | C1H6g07514 | CX6g041592 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| C2H6g25962 | 6:23,185,002-23,187,647 | - | C1H6g08177 | CX6g042762 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| C2H6g16416 | 6:23,191,220-23,196,018 | - | C1H6g22257 | CX6g041956 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005386 | 1:17,313,298-17,315,344 | + | C1H1g16914 | C2H1g11828 | LOC_Os01g33360 | Os01g0517900 | - | Detail |
| CX1g006130 | 1:17,327,488-17,327,856 | - | - | - | - | - | - | Detail |
| CX1g007096 | 1:17,330,223-17,330,628 | + | - | - | - | - | - | Detail |
| CX1g004547 | 1:17,350,275-17,354,795 | - | C1H1g04145 | C2H1g15782 | LOC_Os01g33400 | Os01g0519700 | - | Detail |
| CX1g000622 | 1:17,358,975-17,359,124 | + | - | - | - | - | - | Detail |
| CX1g004089 | 1:17,360,084-17,361,715 | + | C1H1g04459 | C2H1g16612 | LOC_Os01g33410 | Os01g0518400 | - | Detail |
| CX1g000474 | 1:17,362,249-17,369,255 | - | C1H1g01073 | C2H1g11609 | LOC_Os01g33420 | Os01g0518500 | - | Detail |
| CX1g001414 | 1:17,370,220-17,371,414 | + | C1H1g03032 | C2H1g02009 | - | - | - | Detail |
| CX1g003150 | 1:17,375,036-17,376,452 | - | C1H1g14202 | C2H1g08274 | - | Os01g0518651 | - | Detail |
| CX1g006798 | 1:17,382,917-17,383,336 | + | - | - | - | - | - | Detail |
| CX1g004322 | 1:17,392,801-17,393,820 | - | C1H1g02952 | C2H1g05728 | LOC_Os01g33490 | Os01g0519100 | - | Detail |
| CX1g005208 | 1:17,416,739-17,417,689 | + | C1H1g27418 | C2H1g21312 | - | - | - | Detail |
| CX1g006731 | 1:17,419,601-17,419,813 | + | - | - | - | - | - | Detail |
| CX1g003392 | 1:17,443,364-17,443,934 | + | C1H1g28314 | C2H1g17187 | LOC_Os01g33670 | Os01g0520500 | - | Detail |
| CX1g006219 | 1:17,444,926-17,450,135 | - | C1H1g02683 | C2H1g08242 | LOC_Os01g33684 | Os01g0520600 | - | Detail |
| CX1g001751 | 1:17,474,976-17,475,454 | + | - | - | LOC_Os01g33762 | - | - | Detail |
| CX1g001522 | 1:17,475,854-17,477,097 | + | C1H1g27816 | - | LOC_Os01g33762 | Os04g0228300 | - | Detail |
| CX1g002325 | 1:17,498,559-17,506,112 | + | C1H1g04217 | C2H1g00800 | LOC_Os01g33784 | Os01g0521400 | - | Detail |
| CX1g001131 | 1:17,510,007-17,520,140 | + | C1H1g30357 | C2H1g26145 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| CX1g005361 | 1:17,524,355-17,524,687 | + | C1H1g01971 | - | LOC_Os01g32500 | - | - | Detail |