| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g19519 | 5:3,806,535-3,807,523 | + | C1H5g05273 | CX5g039762 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| C2H5g08820 | 5:3,810,342-3,811,410 | - | C1H5g26746 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C2H5g24682 | 5:3,811,471-3,812,055 | - | C1H5g15273 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C2H5g23593 | 5:3,812,886-3,813,561 | - | C1H5g24081 | CX5g038579 | LOC_Os05g08550 | - | - | Detail |
| C2H5g22086 | 5:3,814,422-3,816,906 | - | C1H5g18416 | CX5g037926 | LOC_Os05g08554 | Os05g0178300 | - | Detail |
| C2H5g19576 | 5:3,818,245-3,821,564 | - | C1H5g28500 | CX5g037936 | LOC_Os05g08560 | Os05g0178400 | - | Detail |
| C2H5g23931 | 5:3,828,656-3,831,151 | - | C1H5g30909 | CX5g039091 | LOC_Os05g08570 | Os05g0178600 | - | Detail |
| C2H5g20930 | 5:3,831,186-3,831,443 | - | C1H5g11220 | CX5g038646 | - | Os05g0178600 | - | Detail |
| C2H5g20358 | 5:3,851,213-3,855,100 | + | C1H5g28275 | CX5g038400 | LOC_Os05g08600 | Os05g0178900 | - | Detail |
| C2H5g18108 | 5:3,857,538-3,861,896 | + | C1H5g03795 | CX5g039771 | LOC_Os05g08610 | Os05g0179000 | - | Detail |
| C2H5g28488 | 5:3,873,219-3,873,671 | + | C1H5g15516 | - | LOC_Os08g23900 | - | - | Detail |
| C2H5g17102 | 5:3,895,817-3,897,238 | - | C1H5g19959 | CX5g037983 | LOC_Os05g08640 | Os05g0179300 | - | Detail |
| C2H5g23753 | 5:3,923,426-3,926,532 | + | C1H5g21520 | CX5g039721 | LOC_Os05g08730 | Os05g0179800 | - | Detail |
| C2H5g25802 | 5:3,966,183-3,969,681 | - | C1H5g27830 | CX5g038350 | LOC_Os05g08790 | Os05g0180400 | - | Detail |
| C2H5g06685 | 5:3,970,612-3,973,529 | - | C1H5g02747 | CX5g037875 | LOC_Os05g08800 | Os05g0180500 | - | Detail |
| C2H5g05984 | 5:3,988,380-3,998,378 | - | C1H5g20076 | CX5g036876 | LOC_Os05g08810 | Os05g0180600 | - | Detail |
| C2H5g03050 | 5:3,999,805-4,000,905 | + | C1H5g03323 | CX5g037205 | LOC_Os05g08820 | Os05g0180700 | - | Detail |
| C2H5g11956 | 5:4,009,266-4,015,221 | + | C1H5g21276 | CX5g037851 | LOC_Os05g08840 | Os05g0181000 | - | Detail |
| C2H5g06572 | 5:4,019,186-4,020,189 | - | C1H5g29149 | CX5g037202 | LOC_Os05g08854 | Os05g0181250 | - | Detail |
| C2H5g00592 | 5:4,027,481-4,027,732 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026995 | 3:27,931,384-27,932,362 | - | C1H3g18395 | C2H3g03813 | - | - | - | Detail |
| CX3g028728 | 3:27,939,368-27,946,372 | + | C1H3g00993 | C2H3g12518 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| CX3g029342 | 3:27,948,851-27,952,668 | - | C1H3g31891 | C2H3g09824 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| CX3g028503 | 3:27,956,012-27,956,164 | - | - | - | - | - | - | Detail |
| CX3g029494 | 3:27,957,736-27,957,996 | - | - | - | - | - | - | Detail |
| CX3g026713 | 3:27,963,587-27,965,898 | - | C1H3g25139 | C2H3g06497 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| CX3g029290 | 3:27,968,749-27,970,440 | - | C1H3g11342 | C2H3g02798 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| CX3g030181 | 3:27,973,391-27,976,432 | - | C1H3g30625 | C2H3g03322 | LOC_Os03g51950 | Os03g0729200 | - | Detail |
| CX3g029650 | 3:27,979,201-27,980,932 | - | C1H3g13523 | C2H3g24100 | LOC_Os03g51960 | Os03g0729300 | - | Detail |
| CX3g029152 | 3:27,987,254-27,987,667 | - | C1H3g26452 | - | - | - | - | Detail |
| CX3g026395 | 3:28,004,962-28,008,359 | + | C1H3g25309 | C2H3g29250 | LOC_Os03g51970 | Os03g0729500 | GRF6, OsGRF6 | Detail |
| CX3g025962 | 3:28,010,477-28,011,196 | + | - | - | LOC_Os03g51980 | Os03g0729600 | - | Detail |
| CX3g025921 | 3:28,011,639-28,014,341 | + | C1H3g10749 | C2H3g18708 | LOC_Os03g51984 | Os03g0729700 | - | Detail |
| CX3g030041 | 3:28,019,331-28,021,333 | + | C1H3g20671 | C2H3g00085 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| CX3g029030 | 3:28,021,883-28,026,295 | - | C1H3g08051 | C2H3g12843 | LOC_Os03g52000 | Os03g0729900 | - | Detail |
| CX3g026263 | 3:28,029,371-28,030,876 | - | C1H3g02659 | C2H3g06578 | LOC_Os03g52010 | Os03g0730000 | - | Detail |
| CX3g025471 | 3:28,034,418-28,034,852 | + | - | - | LOC_Os03g52020 | Os03g0730200 | - | Detail |
| CX3g025486 | 3:28,052,656-28,056,903 | + | C1H3g19587 | C2H3g11768 | LOC_Os03g52070 | Os03g0730500 | - | Detail |
| CX3g030109 | 3:28,070,830-28,093,471 | - | C1H3g25117 | C2H3g15444 | LOC_Os03g52090 | Os03g0730800 | - | Detail |
| CX3g024994 | 3:28,096,217-28,098,915 | + | C1H3g02569 | C2H3g30622 | LOC_Os03g52120 | Os03g0731050 | - | Detail |