| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21608 | 3:27,656,719-27,660,241 | - | C1H3g23470 | CX3g028973 | LOC_Os03g52630 | Os03g0736300 | - | Detail |
| C2H3g15503 | 3:27,664,564-27,668,007 | - | C1H3g16767 | CX3g029628 | LOC_Os03g52640 | Os03g0736400 | - | Detail |
| C2H3g14297 | 3:27,669,405-27,673,074 | + | C1H3g06383 | CX3g026452 | LOC_Os03g52650 | Os03g0736500 | - | Detail |
| C2H3g25472 | 3:27,673,881-27,674,926 | - | C1H3g27583 | CX3g030782 | LOC_Os03g52670 | Os03g0736700 | - | Detail |
| C2H3g06997 | 3:27,690,841-27,694,864 | - | C1H3g22100 | CX3g030023 | LOC_Os03g52690 | Os03g0737000 | - | Detail |
| C2H3g03773 | 3:27,700,068-27,708,325 | - | C1H3g13284 | CX3g030091 | LOC_Os03g52700 | Os03g0737200 | OsHOS1 | Detail |
| C2H3g13435 | 3:27,709,054-27,711,006 | - | C1H3g01016 | CX3g030361 | LOC_Os03g52720 | Os03g0737300 | - | Detail |
| C2H3g06862 | 3:27,713,948-27,715,594 | - | C1H3g28619 | CX3g030361 | LOC_Os03g52730 | Os03g0737400 | - | Detail |
| C2H3g04382 | 3:27,716,139-27,720,319 | + | C1H3g18700 | CX3g025820 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| C2H3g27223 | 3:27,724,488-27,727,069 | - | C1H3g06923 | CX3g026634 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| C2H3g08831 | 3:27,729,452-27,739,232 | + | C1H3g13520 | CX3g025574 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| C2H3g00418 | 3:27,739,440-27,742,656 | - | C1H3g22442 | CX3g026366 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| C2H3g24375 | 3:27,742,829-27,746,487 | + | C1H3g19238 | CX3g026865 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| C2H3g01060 | 3:27,747,275-27,765,946 | + | C1H3g14512 | CX3g030189 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| C2H3g05635 | 3:27,767,482-27,772,151 | + | C1H3g21044 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C2H3g05845 | 3:27,783,515-27,787,131 | + | C1H3g07947 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C2H3g02923 | 3:27,794,046-27,796,994 | + | C1H3g24267 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C2H3g01404 | 3:27,805,911-27,807,678 | + | C1H3g14490 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C2H3g15580 | 3:27,837,312-27,841,357 | + | C1H3g22532 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C2H3g17064 | 3:27,842,274-27,846,884 | + | C1H3g30167 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026995 | 3:27,931,384-27,932,362 | - | C1H3g18395 | C2H3g03813 | - | - | - | Detail |
| CX3g028728 | 3:27,939,368-27,946,372 | + | C1H3g00993 | C2H3g12518 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| CX3g029342 | 3:27,948,851-27,952,668 | - | C1H3g31891 | C2H3g09824 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| CX3g028503 | 3:27,956,012-27,956,164 | - | - | - | - | - | - | Detail |
| CX3g029494 | 3:27,957,736-27,957,996 | - | - | - | - | - | - | Detail |
| CX3g026713 | 3:27,963,587-27,965,898 | - | C1H3g25139 | C2H3g06497 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| CX3g029290 | 3:27,968,749-27,970,440 | - | C1H3g11342 | C2H3g02798 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| CX3g030181 | 3:27,973,391-27,976,432 | - | C1H3g30625 | C2H3g03322 | LOC_Os03g51950 | Os03g0729200 | - | Detail |
| CX3g029650 | 3:27,979,201-27,980,932 | - | C1H3g13523 | C2H3g24100 | LOC_Os03g51960 | Os03g0729300 | - | Detail |
| CX3g029152 | 3:27,987,254-27,987,667 | - | C1H3g26452 | - | - | - | - | Detail |
| CX3g026395 | 3:28,004,962-28,008,359 | + | C1H3g25309 | C2H3g29250 | LOC_Os03g51970 | Os03g0729500 | GRF6, OsGRF6 | Detail |
| CX3g025962 | 3:28,010,477-28,011,196 | + | - | - | LOC_Os03g51980 | Os03g0729600 | - | Detail |
| CX3g025921 | 3:28,011,639-28,014,341 | + | C1H3g10749 | C2H3g18708 | LOC_Os03g51984 | Os03g0729700 | - | Detail |
| CX3g030041 | 3:28,019,331-28,021,333 | + | C1H3g20671 | C2H3g00085 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| CX3g029030 | 3:28,021,883-28,026,295 | - | C1H3g08051 | C2H3g12843 | LOC_Os03g52000 | Os03g0729900 | - | Detail |
| CX3g026263 | 3:28,029,371-28,030,876 | - | C1H3g02659 | C2H3g06578 | LOC_Os03g52010 | Os03g0730000 | - | Detail |
| CX3g025471 | 3:28,034,418-28,034,852 | + | - | - | LOC_Os03g52020 | Os03g0730200 | - | Detail |
| CX3g025486 | 3:28,052,656-28,056,903 | + | C1H3g19587 | C2H3g11768 | LOC_Os03g52070 | Os03g0730500 | - | Detail |
| CX3g030109 | 3:28,070,830-28,093,471 | - | C1H3g25117 | C2H3g15444 | LOC_Os03g52090 | Os03g0730800 | - | Detail |
| CX3g024994 | 3:28,096,217-28,098,915 | + | C1H3g02569 | C2H3g30622 | LOC_Os03g52120 | Os03g0731050 | - | Detail |