| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00153 | 5:2,007,532-2,008,846 | - | C2H3g15322 | CX3g028459 | - | - | - | Detail |
| C1H5g17291 | 5:2,036,969-2,037,525 | - | C2H5g03061 | CX5g038058 | - | Os05g0140000 | - | Detail |
| C1H5g01364 | 5:2,037,899-2,040,606 | + | C2H5g22528 | CX5g041027 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| C1H5g10969 | 5:2,048,758-2,050,037 | - | - | - | - | - | - | Detail |
| C1H5g06617 | 5:2,052,448-2,055,156 | + | C2H5g17854 | CX5g041028 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |
| C1H5g27337 | 5:2,056,505-2,060,106 | - | C2H5g11120 | CX5g037434 | LOC_Os05g04860 | Os05g0140600 | - | Detail |
| C1H5g07901 | 5:2,067,373-2,068,757 | - | C2H5g05137 | CX5g037644 | LOC_Os05g04870 | Os05g0140800 | - | Detail |
| C1H5g21345 | 5:2,074,830-2,081,928 | - | C2H5g05092 | CX5g040189 | LOC_Os05g04890 | Os05g0141000 | - | Detail |
| C1H5g19698 | 5:2,084,330-2,090,071 | - | C2H5g10662 | CX5g039228 | LOC_Os05g04914 | Os05g0141200 | - | Detail |
| C1H5g02890 | 5:2,099,945-2,102,971 | - | C2H5g22940 | CX5g039514 | LOC_Os05g04940 | Os05g0141400 | - | Detail |
| C1H5g01265 | 5:2,103,827-2,108,580 | - | C2H5g29281 | CX5g037614 | LOC_Os05g04950 | Os05g0141500 | - | Detail |
| C1H5g28545 | 5:2,115,264-2,124,756 | + | C2H5g24711 | CX5g037763 | LOC_Os05g04960 | Os05g0141700 | - | Detail |
| C1H5g21606 | 5:2,198,360-2,202,078 | + | C2H5g02199 | CX5g040648 | LOC_Os05g05130 | Os05g0143200 | - | Detail |
| C1H5g00987 | 5:2,202,564-2,205,996 | - | C2H5g18500 | CX5g038230 | LOC_Os05g05140 | Os05g0143300 | - | Detail |
| C1H5g04744 | 5:2,208,500-2,210,752 | + | C2H5g21384 | CX5g036859 | LOC_Os05g05150 | Os05g0143400 | - | Detail |
| C1H5g27457 | 5:2,213,636-2,220,102 | + | C2H5g29296 | CX5g036917 | LOC_Os05g05160 | Os05g0143500 | - | Detail |
| C1H5g10365 | 5:2,223,167-2,226,613 | - | C2H5g22685 | CX5g037961 | LOC_Os05g05180 | Os05g0143800 | - | Detail |
| C1H5g29191 | 5:2,230,306-2,237,667 | - | C2H5g06932 | CX5g037824 | LOC_Os05g05200 | Os05g0144000 | - | Detail |
| C1H5g02281 | 5:2,238,489-2,241,863 | + | C2H5g15662 | CX5g039026 | LOC_Os05g05210 | Os05g0144100 | - | Detail |
| C1H5g15096 | 5:2,243,438-2,248,169 | - | C2H5g20065 | CX5g038093 | LOC_Os05g05220 | Os05g0144200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026995 | 3:27,931,384-27,932,362 | - | C1H3g18395 | C2H3g03813 | - | - | - | Detail |
| CX3g028728 | 3:27,939,368-27,946,372 | + | C1H3g00993 | C2H3g12518 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| CX3g029342 | 3:27,948,851-27,952,668 | - | C1H3g31891 | C2H3g09824 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| CX3g028503 | 3:27,956,012-27,956,164 | - | - | - | - | - | - | Detail |
| CX3g029494 | 3:27,957,736-27,957,996 | - | - | - | - | - | - | Detail |
| CX3g026713 | 3:27,963,587-27,965,898 | - | C1H3g25139 | C2H3g06497 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| CX3g029290 | 3:27,968,749-27,970,440 | - | C1H3g11342 | C2H3g02798 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| CX3g030181 | 3:27,973,391-27,976,432 | - | C1H3g30625 | C2H3g03322 | LOC_Os03g51950 | Os03g0729200 | - | Detail |
| CX3g029650 | 3:27,979,201-27,980,932 | - | C1H3g13523 | C2H3g24100 | LOC_Os03g51960 | Os03g0729300 | - | Detail |
| CX3g029152 | 3:27,987,254-27,987,667 | - | C1H3g26452 | - | - | - | - | Detail |
| CX3g026395 | 3:28,004,962-28,008,359 | + | C1H3g25309 | C2H3g29250 | LOC_Os03g51970 | Os03g0729500 | GRF6, OsGRF6 | Detail |
| CX3g025962 | 3:28,010,477-28,011,196 | + | - | - | LOC_Os03g51980 | Os03g0729600 | - | Detail |
| CX3g025921 | 3:28,011,639-28,014,341 | + | C1H3g10749 | C2H3g18708 | LOC_Os03g51984 | Os03g0729700 | - | Detail |
| CX3g030041 | 3:28,019,331-28,021,333 | + | C1H3g20671 | C2H3g00085 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| CX3g029030 | 3:28,021,883-28,026,295 | - | C1H3g08051 | C2H3g12843 | LOC_Os03g52000 | Os03g0729900 | - | Detail |
| CX3g026263 | 3:28,029,371-28,030,876 | - | C1H3g02659 | C2H3g06578 | LOC_Os03g52010 | Os03g0730000 | - | Detail |
| CX3g025471 | 3:28,034,418-28,034,852 | + | - | - | LOC_Os03g52020 | Os03g0730200 | - | Detail |
| CX3g025486 | 3:28,052,656-28,056,903 | + | C1H3g19587 | C2H3g11768 | LOC_Os03g52070 | Os03g0730500 | - | Detail |
| CX3g030109 | 3:28,070,830-28,093,471 | - | C1H3g25117 | C2H3g15444 | LOC_Os03g52090 | Os03g0730800 | - | Detail |
| CX3g024994 | 3:28,096,217-28,098,915 | + | C1H3g02569 | C2H3g30622 | LOC_Os03g52120 | Os03g0731050 | - | Detail |