| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08386 | 1:18,705,324-18,710,594 | + | C1H1g20457 | CX1g001884 | LOC_Os01g36890 | Os01g0550000 | - | Detail |
| C2H1g22192 | 1:18,713,851-18,721,977 | - | C1H1g00890 | CX1g002013 | LOC_Os01g36930 | Os01g0550100 | - | Detail |
| C2H1g00742 | 1:18,729,917-18,733,479 | + | C1H1g25729 | CX1g001577 | LOC_Os01g36940 | Os01g0550200 | - | Detail |
| C2H1g09455 | 1:18,733,837-18,736,546 | - | C1H1g00769 | CX1g007043 | LOC_Os01g36950 | Os01g0550300 | OsNRP1 | Detail |
| C2H1g20446 | 1:18,758,480-18,761,392 | + | C1H1g06924 | CX1g003924 | LOC_Os01g36970 | Os01g0550600 | - | Detail |
| C2H1g12274 | 1:18,773,053-18,775,613 | + | C1H1g27251 | CX1g006692 | LOC_Os01g37000 | Os01g0550800 | - | Detail |
| C2H1g25015 | 1:18,792,951-18,794,511 | + | C1H1g27251 | CX1g006692 | LOC_Os01g37020 | Os01g0550900 | - | Detail |
| C2H1g24569 | 1:18,803,948-18,805,487 | + | C1H1g21475 | CX1g003655 | LOC_Os01g37040 | Os01g0551000 | - | Detail |
| C2H1g17498 | 1:18,807,563-18,809,924 | - | C1H1g21610 | CX1g003689 | LOC_Os01g37050 | Os01g0551100 | - | Detail |
| C2H1g10614 | 1:18,818,901-18,819,408 | + | C1H1g07361 | CX1g000348 | LOC_Os01g37090 | Os01g0551400 | - | Detail |
| C2H1g24111 | 1:18,837,205-18,838,438 | + | C1H1g29217 | CX1g000887 | LOC_Os01g37110 | Os01g0551800 | - | Detail |
| C2H1g05745 | 1:18,839,887-18,852,904 | - | C1H1g25957 | CX1g004474 | LOC_Os01g37120 | Os01g0551900 | - | Detail |
| C2H1g00330 | 1:18,865,078-18,868,667 | + | C1H1g26828 | CX1g005934 | LOC_Os01g37130 | Os01g0552300 | - | Detail |
| C2H1g27817 | 1:18,874,572-18,875,897 | + | C1H1g13294 | CX1g000393 | LOC_Os01g37210 | Os01g0553200 | - | Detail |
| C2H1g21553 | 1:18,920,948-18,921,943 | + | C1H1g12209 | CX1g006462 | LOC_Os01g37460 | Os01g0555100 | OsRZF1, LMGC1 | Detail |
| C2H1g22562 | 1:18,922,950-18,926,664 | - | C1H1g17258 | CX1g003044 | LOC_Os01g37470 | Os01g0555200 | - | Detail |
| C2H1g15114 | 1:18,927,390-18,929,410 | - | C1H1g02356 | CX1g004191 | LOC_Os01g37480 | Os01g0555300 | - | Detail |
| C2H1g15561 | 1:18,934,494-18,935,498 | - | C1H1g21947 | CX1g003072 | LOC_Os01g37490 | Os01g0555600 | - | Detail |
| C2H1g11457 | 1:18,938,418-18,940,772 | - | C1H1g23119 | CX1g002456 | LOC_Os01g37510 | Os01g0555800 | OsPDF1A | Detail |
| C2H1g24925 | 1:18,948,728-18,952,497 | - | C1H1g10331 | CX1g007105 | - | Os01g0807000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026320 | 3:27,721,165-27,721,646 | + | - | - | - | - | - | Detail |
| CX3g026793 | 3:27,731,953-27,734,443 | + | C1H3g18025 | C2H3g21598 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| CX3g027533 | 3:27,741,252-27,746,959 | + | C1H3g31013 | C2H3g10415 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| CX3g030086 | 3:27,750,400-27,755,209 | - | C1H3g03565 | C2H3g30083 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| CX3g025544 | 3:27,764,844-27,766,076 | + | C1H3g02226 | C2H3g21290 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| CX3g026178 | 3:27,767,802-27,772,740 | - | C1H3g17376 | C2H3g14903 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| CX3g028096 | 3:27,789,295-27,789,899 | - | C1H3g20845 | C2H3g08813 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| CX3g027385 | 3:27,791,384-27,796,255 | - | C1H3g06495 | C2H3g26898 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| CX3g029433 | 3:27,803,454-27,812,491 | - | C1H3g31203 | C2H3g04769 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| CX3g029277 | 3:27,827,655-27,829,549 | + | C1H3g28999 | C2H3g17627 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| CX3g027566 | 3:27,830,000-27,836,008 | - | C1H3g18589 | C2H3g26829 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| CX3g025747 | 3:27,839,270-27,839,440 | - | - | - | - | - | - | Detail |
| CX3g027050 | 3:27,859,780-27,861,548 | - | C1H3g10075 | C2H3g07488 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| CX3g030777 | 3:27,883,583-27,884,683 | + | - | - | LOC_Os03g51760 | Os03g0727800 | - | Detail |
| CX3g031106 | 3:27,889,652-27,895,309 | - | C1H3g08935 | C2H3g29705 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| CX3g025416 | 3:27,900,001-27,902,627 | + | C1H3g03486 | C2H3g15707 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| CX3g026236 | 3:27,905,544-27,907,337 | + | C1H3g07265 | C2H3g24120 | LOC_Os03g51840 | Os03g0728200 | OsNPPR3, FLO14 | Detail |
| CX3g027280 | 3:27,909,120-27,910,541 | + | - | - | LOC_Os03g51870 | Os03g0728500 | - | Detail |
| CX3g027150 | 3:27,912,830-27,914,675 | - | C1H3g05198 | C2H3g03478 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| CX3g028942 | 3:27,925,157-27,925,483 | - | C1H3g18395 | C2H3g03813 | LOC_Os03g51890 | - | - | Detail |