| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21921 | 3:11,220,180-11,220,545 | - | C1H3g02489 | CX3g028477 | - | - | - | Detail |
| C2H3g27756 | 3:11,220,386-11,226,741 | + | C1H3g18174 | CX3g024945 | LOC_Os03g21990 | Os03g0339100 | - | Detail |
| C2H3g08189 | 3:11,228,016-11,229,869 | + | C1H3g23493 | CX3g029752 | LOC_Os03g22010 | Os03g0339300 | - | Detail |
| C2H3g17635 | 3:11,230,821-11,232,950 | + | C1H3g01797 | CX3g029752 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| C2H3g03307 | 3:11,234,346-11,235,564 | - | C1H3g30937 | CX3g026989 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| C2H3g17458 | 3:11,242,758-11,245,895 | + | C1H3g22536 | CX3g028644 | LOC_Os03g22040 | Os03g0339700 | - | Detail |
| C2H3g13815 | 3:11,248,081-11,250,782 | - | C1H3g12381 | CX3g029505 | LOC_Os03g22050 | Os03g0339900 | - | Detail |
| C2H3g21418 | 3:11,256,075-11,258,086 | - | C1H3g28303 | CX3g031266 | LOC_Os03g21900 | Os03g0337600 | - | Detail |
| C2H3g25583 | 3:11,259,712-11,261,137 | - | C1H3g04870 | CX3g031266 | LOC_Os03g22060 | Os03g0340001 | - | Detail |
| C2H3g07473 | 3:11,266,164-11,266,637 | + | C1H3g07849 | CX3g031157 | LOC_Os03g22080 | Os03g0340100 | - | Detail |
| C2H3g21937 | 3:11,284,459-11,290,258 | - | C1H3g19641 | CX3g027881 | LOC_Os03g22120 | Os03g0340500 | - | Detail |
| C2H3g11733 | 3:11,294,651-11,296,579 | + | C1H3g22688 | CX3g028679 | LOC_Os03g22140 | Os03g0340700 | - | Detail |
| C2H3g03250 | 3:11,300,480-11,311,386 | + | C1H3g27719 | CX3g031206 | LOC_Os03g22160 | Os03g0340900 | ARE2 | Detail |
| C2H3g25873 | 3:11,320,223-11,321,048 | + | C1H3g08303 | CX3g029548 | LOC_Os03g22170 | Os03g0341000 | ERF66, OsERF66 | Detail |
| C2H3g03921 | 3:11,324,406-11,326,606 | - | C1H3g00753 | CX3g028062 | LOC_Os03g22180 | Os03g0341100 | - | Detail |
| C2H3g07860 | 3:11,327,474-11,332,982 | - | C1H3g18892 | CX3g030546 | LOC_Os03g22190 | Os03g0341200 | - | Detail |
| C2H3g11247 | 3:11,335,967-11,338,118 | + | C1H3g26990 | CX3g027655 | LOC_Os03g22200 | Os03g0341300 | - | Detail |
| C2H3g16648 | 3:11,346,504-11,347,184 | - | C1H3g04911 | - | LOC_Os03g22210 | Os03g0341600 | - | Detail |
| C2H3g10184 | 3:11,355,961-11,356,580 | - | C1H3g20603 | - | LOC_Os03g22230 | Os03g0342100 | - | Detail |
| C2H3g15206 | 3:11,359,421-11,359,970 | - | C1H3g13653 | - | LOC_Os03g22210 | Os03g0341600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026320 | 3:27,721,165-27,721,646 | + | - | - | - | - | - | Detail |
| CX3g026793 | 3:27,731,953-27,734,443 | + | C1H3g18025 | C2H3g21598 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| CX3g027533 | 3:27,741,252-27,746,959 | + | C1H3g31013 | C2H3g10415 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| CX3g030086 | 3:27,750,400-27,755,209 | - | C1H3g03565 | C2H3g30083 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| CX3g025544 | 3:27,764,844-27,766,076 | + | C1H3g02226 | C2H3g21290 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| CX3g026178 | 3:27,767,802-27,772,740 | - | C1H3g17376 | C2H3g14903 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| CX3g028096 | 3:27,789,295-27,789,899 | - | C1H3g20845 | C2H3g08813 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| CX3g027385 | 3:27,791,384-27,796,255 | - | C1H3g06495 | C2H3g26898 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| CX3g029433 | 3:27,803,454-27,812,491 | - | C1H3g31203 | C2H3g04769 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| CX3g029277 | 3:27,827,655-27,829,549 | + | C1H3g28999 | C2H3g17627 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| CX3g027566 | 3:27,830,000-27,836,008 | - | C1H3g18589 | C2H3g26829 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| CX3g025747 | 3:27,839,270-27,839,440 | - | - | - | - | - | - | Detail |
| CX3g027050 | 3:27,859,780-27,861,548 | - | C1H3g10075 | C2H3g07488 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| CX3g030777 | 3:27,883,583-27,884,683 | + | - | - | LOC_Os03g51760 | Os03g0727800 | - | Detail |
| CX3g031106 | 3:27,889,652-27,895,309 | - | C1H3g08935 | C2H3g29705 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| CX3g025416 | 3:27,900,001-27,902,627 | + | C1H3g03486 | C2H3g15707 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| CX3g026236 | 3:27,905,544-27,907,337 | + | C1H3g07265 | C2H3g24120 | LOC_Os03g51840 | Os03g0728200 | OsNPPR3, FLO14 | Detail |
| CX3g027280 | 3:27,909,120-27,910,541 | + | - | - | LOC_Os03g51870 | Os03g0728500 | - | Detail |
| CX3g027150 | 3:27,912,830-27,914,675 | - | C1H3g05198 | C2H3g03478 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| CX3g028942 | 3:27,925,157-27,925,483 | - | C1H3g18395 | C2H3g03813 | LOC_Os03g51890 | - | - | Detail |