| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00458 | 2:1,262,814-1,264,103 | + | C2H2g12861 | CX2g022216 | LOC_Os02g03420 | Os02g0126500 | - | Detail |
| C1H2g16771 | 2:1,265,648-1,266,711 | + | C2H2g28699 | CX2g023378 | LOC_Os02g03430 | Os02g0126600 | - | Detail |
| C1H2g16904 | 2:1,267,544-1,268,890 | - | C2H2g16801 | - | LOC_Os02g03440 | Os02g0126700 | - | Detail |
| C1H2g17033 | 2:1,268,282-1,269,169 | + | C2H2g24865 | CX2g023197 | - | Os02g0265300 | - | Detail |
| C1H2g12858 | 2:1,269,185-1,270,349 | - | C2H2g02641 | - | LOC_Os02g03440 | Os02g0126700 | - | Detail |
| C1H2g31146 | 2:1,271,463-1,273,526 | + | C2H2g13932 | CX2g022346 | LOC_Os02g03450 | Os02g0126800 | - | Detail |
| C1H2g20013 | 2:1,274,065-1,279,874 | - | C2H2g29798 | CX2g019225 | LOC_Os02g03460 | - | - | Detail |
| C1H2g25011 | 2:1,280,947-1,284,426 | + | C2H2g18564 | CX2g023786 | LOC_Os02g03470 | Os02g0127000 | - | Detail |
| C1H2g17301 | 2:1,285,243-1,285,668 | + | C2H2g01610 | CX2g020169 | LOC_Os02g03520 | Os02g0127500 | - | Detail |
| C1H2g13694 | 2:1,293,421-1,296,645 | + | C2H6g05932 | CX2g019246 | LOC_Os02g03350 | - | - | Detail |
| C1H2g30704 | 2:1,299,474-1,299,764 | + | C2H2g00646 | - | LOC_Os02g03490 | - | - | Detail |
| C1H2g14615 | 2:1,303,182-1,303,481 | + | C2H2g12134 | - | LOC_Os02g03510 | Os02g0127400 | - | Detail |
| C1H2g18967 | 2:1,305,628-1,305,849 | + | C2H2g01610 | CX2g024665 | LOC_Os02g03520 | Os02g0127500 | - | Detail |
| C1H2g30115 | 2:1,308,928-1,311,639 | + | C2H2g08130 | CX2g019370 | LOC_Os02g03530 | Os02g0127600 | - | Detail |
| C1H2g31356 | 2:1,313,072-1,316,832 | - | C2H2g27505 | CX2g021210 | LOC_Os02g03540 | Os02g0127700 | - | Detail |
| C1H2g25221 | 2:1,318,690-1,320,278 | + | C2H2g29523 | CX2g023486 | LOC_Os02g03550 | Os02g0127800 | - | Detail |
| C1H2g23230 | 2:1,321,279-1,323,100 | + | C2H2g02055 | CX2g020386 | LOC_Os02g03560 | Os02g0127900 | - | Detail |
| C1H2g08057 | 2:1,324,213-1,324,749 | + | C2H2g03294 | CX2g022265 | LOC_Os02g03570 | Os02g0128000 | - | Detail |
| C1H2g18811 | 2:1,330,357-1,332,907 | + | C2H2g16807 | CX2g023088 | LOC_Os02g03575 | Os02g0128100 | - | Detail |
| C1H2g09895 | 2:1,334,087-1,338,295 | + | C2H2g02161 | CX2g024791 | LOC_Os02g03580 | Os02g0128200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026320 | 3:27,721,165-27,721,646 | + | - | - | - | - | - | Detail |
| CX3g026793 | 3:27,731,953-27,734,443 | + | C1H3g18025 | C2H3g21598 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| CX3g027533 | 3:27,741,252-27,746,959 | + | C1H3g31013 | C2H3g10415 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| CX3g030086 | 3:27,750,400-27,755,209 | - | C1H3g03565 | C2H3g30083 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| CX3g025544 | 3:27,764,844-27,766,076 | + | C1H3g02226 | C2H3g21290 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| CX3g026178 | 3:27,767,802-27,772,740 | - | C1H3g17376 | C2H3g14903 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| CX3g028096 | 3:27,789,295-27,789,899 | - | C1H3g20845 | C2H3g08813 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| CX3g027385 | 3:27,791,384-27,796,255 | - | C1H3g06495 | C2H3g26898 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| CX3g029433 | 3:27,803,454-27,812,491 | - | C1H3g31203 | C2H3g04769 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| CX3g029277 | 3:27,827,655-27,829,549 | + | C1H3g28999 | C2H3g17627 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| CX3g027566 | 3:27,830,000-27,836,008 | - | C1H3g18589 | C2H3g26829 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| CX3g025747 | 3:27,839,270-27,839,440 | - | - | - | - | - | - | Detail |
| CX3g027050 | 3:27,859,780-27,861,548 | - | C1H3g10075 | C2H3g07488 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| CX3g030777 | 3:27,883,583-27,884,683 | + | - | - | LOC_Os03g51760 | Os03g0727800 | - | Detail |
| CX3g031106 | 3:27,889,652-27,895,309 | - | C1H3g08935 | C2H3g29705 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| CX3g025416 | 3:27,900,001-27,902,627 | + | C1H3g03486 | C2H3g15707 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| CX3g026236 | 3:27,905,544-27,907,337 | + | C1H3g07265 | C2H3g24120 | LOC_Os03g51840 | Os03g0728200 | OsNPPR3, FLO14 | Detail |
| CX3g027280 | 3:27,909,120-27,910,541 | + | - | - | LOC_Os03g51870 | Os03g0728500 | - | Detail |
| CX3g027150 | 3:27,912,830-27,914,675 | - | C1H3g05198 | C2H3g03478 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| CX3g028942 | 3:27,925,157-27,925,483 | - | C1H3g18395 | C2H3g03813 | LOC_Os03g51890 | - | - | Detail |