| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g23215 | 7:2,400,856-2,407,274 | - | C1H7g20992 | CX7g048419 | LOC_Os07g05610 | Os07g0150500 | - | Detail |
| C2H7g26391 | 7:2,408,457-2,409,139 | + | C1H4g05987 | CX7g046244 | - | - | - | Detail |
| C2H7g21271 | 7:2,411,804-2,416,061 | - | C1H7g11750 | CX7g049123 | LOC_Os07g05620 | Os07g0150700 | CIPK23, OsCIPK23, Os-CIPK23 | Detail |
| C2H7g09771 | 7:2,445,966-2,446,196 | - | - | CX7g050005 | - | Os07g0150901 | - | Detail |
| C2H7g02050 | 7:2,461,670-2,462,257 | + | - | CX7g046437 | LOC_Os07g05630 | Os07g0151100 | MIL1, mil1 | Detail |
| C2H7g10221 | 7:2,465,777-2,466,070 | + | - | - | - | - | - | Detail |
| C2H7g18704 | 7:2,466,264-2,467,171 | + | - | CX7g048161 | - | - | - | Detail |
| C2H7g08918 | 7:2,471,399-2,474,604 | + | C1H7g30095 | CX7g046612 | LOC_Os07g05640 | Os07g0151200 | OsINT2 | Detail |
| C2H7g00952 | 7:2,475,731-2,477,451 | + | C1H7g19810 | CX7g046240 | LOC_Os07g05650 | Os07g0151300 | - | Detail |
| C2H7g28976 | 7:2,500,484-2,501,325 | + | C1H7g11755 | CX7g049717 | LOC_Os07g05670 | - | - | Detail |
| C2H7g05765 | 7:2,501,368-2,503,999 | + | C1H7g11755 | - | LOC_Os07g05670 | - | - | Detail |
| C2H7g27358 | 7:2,510,350-2,511,514 | + | C1H7g16809 | CX7g049717 | LOC_Os07g05690 | Os07g0151700 | - | Detail |
| C2H7g21395 | 7:2,515,168-2,516,603 | - | C1H7g19382 | - | LOC_Os07g05700 | Os07g0151800 | - | Detail |
| C2H7g02277 | 7:2,521,221-2,521,599 | - | C1H7g24936 | - | LOC_Os07g05710 | Os07g0151900 | - | Detail |
| C2H7g13193 | 7:2,545,793-2,547,133 | + | C1H7g23187 | CX7g047890 | LOC_Os07g05720 | Os07g0152000 | OsTCP21, TCP21 | Detail |
| C2H7g03119 | 7:2,552,293-2,557,003 | - | C1H7g21805 | CX7g047180 | LOC_Os07g05740 | Os07g0152200 | - | Detail |
| C2H7g05467 | 7:2,556,790-2,557,065 | + | - | - | - | Os07g0152101 | - | Detail |
| C2H7g26144 | 7:2,566,492-2,567,575 | + | C1H7g21910 | CX7g046636 | LOC_Os07g05800 | Os07g0152700 | - | Detail |
| C2H7g03553 | 7:2,568,816-2,575,889 | + | C1H7g31721 | CX7g046057 | LOC_Os07g05820 | Os07g0152900 | - | Detail |
| C2H7g02960 | 7:2,576,200-2,578,314 | - | C1H7g16794 | CX7g047492 | LOC_Os07g05830 | Os07g0153000 | OsJAZ2, OsTIFY5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027992 | 3:27,560,762-27,564,037 | + | C1H3g18603 | C2H3g16773 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| CX3g029558 | 3:27,565,418-27,566,083 | - | - | - | LOC_Os03g51390 | Os03g0723700 | - | Detail |
| CX3g030004 | 3:27,578,068-27,578,421 | - | C1H3g21377 | - | LOC_Os03g51420 | Os03g0724000 | - | Detail |
| CX3g025224 | 3:27,588,464-27,590,023 | + | C1H3g29238 | C2H3g11512 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| CX3g028077 | 3:27,591,613-27,595,307 | - | C1H3g20683 | C2H3g26453 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| CX3g028354 | 3:27,605,169-27,605,552 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX3g025441 | 3:27,614,589-27,614,978 | - | C1H3g30120 | C2H3g05139 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| CX3g025693 | 3:27,617,740-27,619,714 | - | C1H3g05968 | C2H3g13019 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| CX3g027196 | 3:27,620,513-27,622,294 | + | C1H3g04363 | C2H3g05753 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| CX3g028478 | 3:27,622,614-27,623,952 | - | C1H3g31832 | C2H3g21138 | LOC_Os03g51490 | Os03g0724800 | - | Detail |
| CX3g028392 | 3:27,643,431-27,643,643 | + | - | - | - | - | - | Detail |
| CX3g031236 | 3:27,648,478-27,648,795 | + | - | - | - | - | - | Detail |
| CX3g025339 | 3:27,658,838-27,660,372 | + | C1H3g31832 | C2H3g21138 | LOC_Os03g51495 | Os03g0724800 | - | Detail |
| CX3g028977 | 3:27,664,818-27,665,129 | + | C1H3g15090 | C2H3g12890 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| CX3g030919 | 3:27,666,594-27,676,138 | + | C1H3g02037 | C2H3g20716 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| CX3g029201 | 3:27,678,053-27,683,595 | + | C1H3g18345 | C2H3g06290 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| CX3g028312 | 3:27,684,772-27,688,194 | + | C1H3g09008 | C2H3g04142 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| CX3g029280 | 3:27,707,505-27,707,693 | + | - | - | - | - | - | Detail |
| CX3g029203 | 3:27,715,861-27,717,221 | + | C1H3g28685 | C2H3g06970 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| CX3g030824 | 3:27,718,541-27,718,693 | + | - | - | - | - | - | Detail |