| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g05719 | 7:1,804,205-1,804,696 | + | C2H7g04010 | CX7g048543 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| C1H7g16311 | 7:1,809,748-1,811,202 | - | C2H7g14480 | CX7g049302 | LOC_Os07g04970 | Os07g0142700 | - | Detail |
| C1H7g23399 | 7:1,817,378-1,820,269 | + | C2H7g21727 | CX7g046865 | LOC_Os07g04990 | Os07g0142900 | - | Detail |
| C1H7g28462 | 7:1,821,068-1,824,762 | + | C2H7g27275 | CX7g048357 | LOC_Os07g05000 | Os07g0143000 | - | Detail |
| C1H7g12552 | 7:1,830,078-1,831,825 | + | C2H7g14513 | CX7g048872 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| C1H7g09908 | 7:1,841,065-1,843,557 | - | C2H7g20668 | CX7g046854 | - | - | - | Detail |
| C1H7g25943 | 7:1,846,323-1,847,257 | - | C2H7g24721 | CX7g048569 | LOC_Os07g05040 | Os07g0143600 | - | Detail |
| C1H7g01640 | 7:1,848,063-1,853,483 | - | C2H7g00608 | CX7g048216 | LOC_Os07g05050 | Os07g0143700 | OsRH53 | Detail |
| C1H7g27141 | 7:1,869,555-1,869,847 | + | C2H4g24787 | CX7g050400 | - | - | - | Detail |
| C1H7g10624 | 7:1,874,356-1,876,217 | + | C2H7g04210 | CX7g049966 | LOC_Os07g05110 | Os07g0144500 | - | Detail |
| C1H7g23348 | 7:1,876,620-1,878,553 | - | C2H7g16275 | CX7g049847 | LOC_Os07g05120 | - | - | Detail |
| C1H7g28674 | 7:1,879,312-1,884,015 | - | C2H7g17564 | - | - | - | - | Detail |
| C1H7g03354 | 7:1,885,784-1,886,261 | + | C2H7g12809 | - | - | Os07g0144732 | - | Detail |
| C1H7g17569 | 7:1,902,974-1,908,418 | - | C2H7g13737 | CX7g049183 | LOC_Os07g05190 | Os07g0145400 | - | Detail |
| C1H7g14394 | 7:1,922,066-1,922,779 | - | C2H7g08515 | CX7g049547 | LOC_Os07g05260 | Os07g0146300 | - | Detail |
| C1H7g28358 | 7:1,936,905-1,938,030 | + | C2H7g29915 | CX7g048696 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| C1H7g21360 | 7:2,036,231-2,037,309 | + | C2H7g29915 | CX7g048670 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| C1H7g08457 | 7:2,038,918-2,039,753 | + | C2H7g26151 | CX7g046114 | LOC_Os07g05365 | Os07g0147550 | - | Detail |
| C1H7g12237 | 7:2,040,318-2,043,518 | - | C2H7g04201 | CX7g047728 | LOC_Os07g05370 | Os07g0147600 | - | Detail |
| C1H7g27117 | 7:2,047,482-2,049,662 | + | C2H7g24746 | CX7g049484 | LOC_Os07g05380 | Os07g0147700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027992 | 3:27,560,762-27,564,037 | + | C1H3g18603 | C2H3g16773 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| CX3g029558 | 3:27,565,418-27,566,083 | - | - | - | LOC_Os03g51390 | Os03g0723700 | - | Detail |
| CX3g030004 | 3:27,578,068-27,578,421 | - | C1H3g21377 | - | LOC_Os03g51420 | Os03g0724000 | - | Detail |
| CX3g025224 | 3:27,588,464-27,590,023 | + | C1H3g29238 | C2H3g11512 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| CX3g028077 | 3:27,591,613-27,595,307 | - | C1H3g20683 | C2H3g26453 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| CX3g028354 | 3:27,605,169-27,605,552 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX3g025441 | 3:27,614,589-27,614,978 | - | C1H3g30120 | C2H3g05139 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| CX3g025693 | 3:27,617,740-27,619,714 | - | C1H3g05968 | C2H3g13019 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| CX3g027196 | 3:27,620,513-27,622,294 | + | C1H3g04363 | C2H3g05753 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| CX3g028478 | 3:27,622,614-27,623,952 | - | C1H3g31832 | C2H3g21138 | LOC_Os03g51490 | Os03g0724800 | - | Detail |
| CX3g028392 | 3:27,643,431-27,643,643 | + | - | - | - | - | - | Detail |
| CX3g031236 | 3:27,648,478-27,648,795 | + | - | - | - | - | - | Detail |
| CX3g025339 | 3:27,658,838-27,660,372 | + | C1H3g31832 | C2H3g21138 | LOC_Os03g51495 | Os03g0724800 | - | Detail |
| CX3g028977 | 3:27,664,818-27,665,129 | + | C1H3g15090 | C2H3g12890 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| CX3g030919 | 3:27,666,594-27,676,138 | + | C1H3g02037 | C2H3g20716 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| CX3g029201 | 3:27,678,053-27,683,595 | + | C1H3g18345 | C2H3g06290 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| CX3g028312 | 3:27,684,772-27,688,194 | + | C1H3g09008 | C2H3g04142 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| CX3g029280 | 3:27,707,505-27,707,693 | + | - | - | - | - | - | Detail |
| CX3g029203 | 3:27,715,861-27,717,221 | + | C1H3g28685 | C2H3g06970 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| CX3g030824 | 3:27,718,541-27,718,693 | + | - | - | - | - | - | Detail |