| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g21854 | 8:16,718,038-16,727,898 | + | C2H8g17981 | CX8g051472 | LOC_Os08g30810 | Os08g0398700 | - | Detail |
| C1H8g27302 | 8:16,728,116-16,729,662 | - | C2H8g13036 | CX8g051035 | LOC_Os08g30820 | Os08g0398800 | - | Detail |
| C1H8g26891 | 8:16,733,194-16,735,828 | + | C2H8g09132 | CX8g054201 | LOC_Os08g30870 | Os08g0399300 | - | Detail |
| C1H8g06703 | 8:16,741,399-16,748,023 | - | C2H8g10697 | CX8g052035 | LOC_Os08g41410 | Os08g0399600 | - | Detail |
| C1H8g02176 | 8:16,753,044-16,757,649 | + | C2H8g01928 | CX8g054146 | LOC_Os08g30900 | Os08g0400000 | - | Detail |
| C1H8g25921 | 8:16,774,117-16,778,075 | + | C2H8g15676 | CX8g053096 | LOC_Os08g30930 | Os08g0400300 | - | Detail |
| C1H8g17488 | 8:16,782,277-16,790,389 | - | C2H8g23230 | CX8g052510 | LOC_Os08g31030 | Os08g0401500 | - | Detail |
| C1H8g13105 | 8:16,800,982-16,812,237 | - | C2H8g29320 | CX8g051880 | LOC_Os08g31060 | Os08g0401800 | - | Detail |
| C1H8g13579 | 8:16,838,796-16,839,593 | + | C2H8g12115 | CX8g051861 | LOC_Os08g31090 | Os08g0402500 | - | Detail |
| C1H8g26005 | 8:16,853,489-16,859,030 | - | C2H8g17205 | CX8g052994 | LOC_Os08g31130 | Os08g0402800 | - | Detail |
| C1H8g00583 | 8:16,872,247-16,872,998 | + | C2H8g15183 | CX8g052597 | LOC_Os08g31140 | Os08g0403300 | - | Detail |
| C1H8g23748 | 8:16,904,324-16,912,068 | + | C2H8g22555 | CX8g053213 | LOC_Os08g31219 | Os08g0404200 | mtRPL27a, S27 | Detail |
| C1H8g17631 | 8:16,976,354-16,977,017 | + | C2H8g04940 | CX8g051643 | LOC_Os08g31340 | Os08g0405700 | - | Detail |
| C1H8g29786 | 8:16,977,147-16,979,519 | + | C2H8g17832 | CX8g051643 | LOC_Os08g31340 | Os08g0405700 | - | Detail |
| C1H8g18510 | 8:17,014,662-17,020,021 | + | C2H8g29711 | CX8g052848 | LOC_Os08g31410 | Os08g0406400 | - | Detail |
| C1H8g14392 | 8:17,031,863-17,035,165 | + | C2H8g06603 | CX8g054226 | LOC_Os08g31460 | Os08g0407000 | PDD | Detail |
| C1H8g24250 | 8:17,039,104-17,044,648 | + | - | CX8g053291 | LOC_Os08g31470 | Os08g0407200 | - | Detail |
| C1H8g19427 | 8:17,062,369-17,063,048 | - | C2H8g06389 | CX8g053895 | LOC_Os08g31510 | Os08g0407600 | - | Detail |
| C1H8g26810 | 8:17,085,740-17,092,063 | + | C2H8g17730 | CX8g051632 | LOC_Os08g31560 | Os08g0408200 | SRWD4, SRWD4, OsWD40-160 | Detail |
| C1H8g19193 | 8:17,133,844-17,136,841 | + | C2H8g20460 | CX8g052041 | LOC_Os08g31630 | Os08g0409100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025771 | 3:27,230,867-27,233,441 | + | C1H3g18557 | C2H3g23833 | LOC_Os03g50870 | Os03g0717900 | - | Detail |
| CX3g031328 | 3:27,234,165-27,237,569 | - | C1H3g24319 | C2H3g04275 | LOC_Os03g50880 | Os03g0718000 | OASB2 | Detail |
| CX3g028008 | 3:27,241,415-27,242,977 | + | C1H3g01613 | C2H3g25200 | LOC_Os03g50885 | Os03g0718100 | - | Detail |
| CX3g028246 | 3:27,244,684-27,247,041 | - | C1H3g29943 | C2H3g19768 | LOC_Os03g50900 | Os03g0718200 | - | Detail |
| CX3g026542 | 3:27,249,348-27,249,631 | - | - | - | - | Os03g0718300 | - | Detail |
| CX3g026893 | 3:27,259,776-27,260,489 | + | - | C2H3g06035 | LOC_Os03g50920 | Os03g0718500 | - | Detail |
| CX3g028458 | 3:27,269,784-27,272,484 | - | C1H3g23147 | C2H3g13023 | LOC_Os03g50940 | Os03g0718600 | OsCOX11 | Detail |
| CX3g025864 | 3:27,281,095-27,281,566 | + | C1H3g01568 | C2H3g21464 | LOC_Os03g50960 | Os03g0718800 | - | Detail |
| CX3g030965 | 3:27,285,693-27,289,759 | - | C1H3g22111 | C2H3g23829 | LOC_Os03g50970 | Os03g0719000 | - | Detail |
| CX3g028424 | 3:27,297,993-27,304,769 | + | C1H3g19794 | C2H3g02193 | LOC_Os03g50980 | Os03g0719100 | SIZ2, OsSIZ2 | Detail |
| CX3g025374 | 3:27,307,581-27,314,926 | - | C1H3g27091 | C2H3g22670 | LOC_Os03g51000 | Os03g0719300 | - | Detail |
| CX3g028369 | 3:27,318,578-27,321,407 | - | C1H3g07073 | C2H3g02088 | LOC_Os03g51010 | Os03g0719400 | - | Detail |
| CX3g030509 | 3:27,327,245-27,333,278 | - | C1H3g18727 | C2H3g19826 | LOC_Os03g51020 | Os03g0719500 | - | Detail |
| CX3g025792 | 3:27,337,678-27,341,611 | - | C1H3g17828 | C2H3g21521 | LOC_Os03g51030 | Os03g0719800 | PHYA, phyA, PHYA* (phyA), PHYA*, Phya, PHY18, phy 18, OsPHYA | Detail |
| CX3g027542 | 3:27,348,568-27,350,818 | - | C1H3g02668 | C2H3g23219 | LOC_Os03g51040 | Os03g0719850 | - | Detail |
| CX3g029279 | 3:27,352,518-27,355,828 | - | C1H3g04945 | C2H3g09005 | LOC_Os03g51050 | Os03g0719900 | - | Detail |
| CX3g026564 | 3:27,358,636-27,359,148 | - | - | C2H10g15556 | LOC_Os03g49740 | - | - | Detail |
| CX3g026462 | 3:27,369,051-27,376,672 | + | C1H3g17570 | C2H3g13711 | LOC_Os03g51080 | Os03g0720300 | - | Detail |
| CX3g028983 | 3:27,430,408-27,431,828 | + | C1H3g27041 | C2H3g08962 | LOC_Os03g51110 | Os03g0720800 | Os2R_MYB41 | Detail |
| CX3g027802 | 3:27,442,260-27,464,831 | + | C1H3g28337 | C2H3g28611 | LOC_Os03g51140 | Os03g0721200 | - | Detail |