| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g07516 | 8:6,798,809-6,799,927 | - | C2H8g03236 | CX8g053961 | LOC_Os08g13980 | Os08g0237800 | - | Detail |
| C1H8g20706 | 8:6,801,483-6,807,279 | + | C2H8g12133 | CX8g053988 | LOC_Os08g13990 | Os08g0238100 | - | Detail |
| C1H8g13003 | 8:6,807,798-6,811,111 | + | C2H8g18276 | - | LOC_Os08g14000 | Os08g0238200 | - | Detail |
| C1H8g21185 | 8:6,811,958-6,812,303 | - | C2H8g02201 | CX8g053942 | - | - | - | Detail |
| C1H8g01631 | 8:6,815,148-6,819,458 | + | C2H8g04090 | - | LOC_Os08g14020 | Os08g0238500 | - | Detail |
| C1H8g11253 | 8:6,822,615-6,827,731 | + | C2H8g16927 | - | LOC_Os08g14000 | Os08g0238200 | - | Detail |
| C1H8g24242 | 8:6,831,234-6,831,506 | + | C2H8g18161 | CX10g010143 | LOC_Os08g14070 | Os08g0239000 | - | Detail |
| C1H8g09108 | 8:6,861,339-6,864,917 | + | C2H8g16463 | - | LOC_Os08g14109 | Os08g0239300 | - | Detail |
| C1H8g11898 | 8:6,873,264-6,873,884 | + | C2H8g13218 | CX8g051657 | LOC_Os08g14180 | Os08g0239900 | - | Detail |
| C1H8g23733 | 8:6,877,395-6,878,586 | + | C2H8g08966 | CX8g051657 | LOC_Os08g14180 | Os08g0239900 | - | Detail |
| C1H8g27491 | 8:6,900,950-6,903,858 | - | C2H8g02656 | CX8g052822 | LOC_Os08g14190 | Os08g0240000 | - | Detail |
| C1H8g28862 | 8:6,908,652-6,908,912 | - | - | - | - | - | - | Detail |
| C1H8g05338 | 8:6,909,020-6,909,235 | + | - | CX8g051259 | - | - | - | Detail |
| C1H8g17157 | 8:6,911,927-6,914,652 | + | C2H8g06005 | CX8g051033 | LOC_Os08g14200 | Os08g0240500 | - | Detail |
| C1H8g28847 | 8:6,917,746-6,918,871 | + | C2H8g03328 | CX8g052493 | LOC_Os08g14210 | Os08g0240566 | OsXTH5 | Detail |
| C1H8g15111 | 8:6,919,315-6,922,335 | - | C2H8g03714 | CX8g053841 | LOC_Os08g14220 | Os08g0240600 | - | Detail |
| C1H8g01311 | 8:6,922,480-6,923,534 | - | C2H8g03714 | CX8g053841 | LOC_Os08g14220 | Os08g0240600 | - | Detail |
| C1H8g08664 | 8:6,930,171-6,940,161 | + | C2H8g15997 | CX8g053804 | LOC_Os08g14230 | Os08g0240800 | - | Detail |
| C1H8g24239 | 8:6,956,160-6,960,156 | + | C2H8g20415 | - | LOC_Os08g14310 | Os08g0241300 | - | Detail |
| C1H8g22448 | 8:6,966,549-6,968,517 | + | C2H8g02554 | CX8g053993 | LOC_Os08g14320 | Os08g0241400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025771 | 3:27,230,867-27,233,441 | + | C1H3g18557 | C2H3g23833 | LOC_Os03g50870 | Os03g0717900 | - | Detail |
| CX3g031328 | 3:27,234,165-27,237,569 | - | C1H3g24319 | C2H3g04275 | LOC_Os03g50880 | Os03g0718000 | OASB2 | Detail |
| CX3g028008 | 3:27,241,415-27,242,977 | + | C1H3g01613 | C2H3g25200 | LOC_Os03g50885 | Os03g0718100 | - | Detail |
| CX3g028246 | 3:27,244,684-27,247,041 | - | C1H3g29943 | C2H3g19768 | LOC_Os03g50900 | Os03g0718200 | - | Detail |
| CX3g026542 | 3:27,249,348-27,249,631 | - | - | - | - | Os03g0718300 | - | Detail |
| CX3g026893 | 3:27,259,776-27,260,489 | + | - | C2H3g06035 | LOC_Os03g50920 | Os03g0718500 | - | Detail |
| CX3g028458 | 3:27,269,784-27,272,484 | - | C1H3g23147 | C2H3g13023 | LOC_Os03g50940 | Os03g0718600 | OsCOX11 | Detail |
| CX3g025864 | 3:27,281,095-27,281,566 | + | C1H3g01568 | C2H3g21464 | LOC_Os03g50960 | Os03g0718800 | - | Detail |
| CX3g030965 | 3:27,285,693-27,289,759 | - | C1H3g22111 | C2H3g23829 | LOC_Os03g50970 | Os03g0719000 | - | Detail |
| CX3g028424 | 3:27,297,993-27,304,769 | + | C1H3g19794 | C2H3g02193 | LOC_Os03g50980 | Os03g0719100 | SIZ2, OsSIZ2 | Detail |
| CX3g025374 | 3:27,307,581-27,314,926 | - | C1H3g27091 | C2H3g22670 | LOC_Os03g51000 | Os03g0719300 | - | Detail |
| CX3g028369 | 3:27,318,578-27,321,407 | - | C1H3g07073 | C2H3g02088 | LOC_Os03g51010 | Os03g0719400 | - | Detail |
| CX3g030509 | 3:27,327,245-27,333,278 | - | C1H3g18727 | C2H3g19826 | LOC_Os03g51020 | Os03g0719500 | - | Detail |
| CX3g025792 | 3:27,337,678-27,341,611 | - | C1H3g17828 | C2H3g21521 | LOC_Os03g51030 | Os03g0719800 | PHYA, phyA, PHYA* (phyA), PHYA*, Phya, PHY18, phy 18, OsPHYA | Detail |
| CX3g027542 | 3:27,348,568-27,350,818 | - | C1H3g02668 | C2H3g23219 | LOC_Os03g51040 | Os03g0719850 | - | Detail |
| CX3g029279 | 3:27,352,518-27,355,828 | - | C1H3g04945 | C2H3g09005 | LOC_Os03g51050 | Os03g0719900 | - | Detail |
| CX3g026564 | 3:27,358,636-27,359,148 | - | - | C2H10g15556 | LOC_Os03g49740 | - | - | Detail |
| CX3g026462 | 3:27,369,051-27,376,672 | + | C1H3g17570 | C2H3g13711 | LOC_Os03g51080 | Os03g0720300 | - | Detail |
| CX3g028983 | 3:27,430,408-27,431,828 | + | C1H3g27041 | C2H3g08962 | LOC_Os03g51110 | Os03g0720800 | Os2R_MYB41 | Detail |
| CX3g027802 | 3:27,442,260-27,464,831 | + | C1H3g28337 | C2H3g28611 | LOC_Os03g51140 | Os03g0721200 | - | Detail |