| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24032 | 4:29,548,335-29,550,094 | + | C1H4g00962 | CX4g034090 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| C2H4g19769 | 4:29,553,266-29,554,735 | + | C1H4g27883 | CX4g034422 | LOC_Os04g57430 | Os04g0670100 | - | Detail |
| C2H4g02826 | 4:29,555,017-29,558,458 | - | C1H4g27420 | CX4g033521 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| C2H4g28360 | 4:29,562,402-29,567,210 | - | C1H4g13887 | CX4g031684 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| C2H4g01861 | 4:29,567,779-29,569,469 | + | C1H4g28653 | CX4g032812 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| C2H4g11996 | 4:29,571,944-29,573,613 | + | C1H4g15123 | CX4g032203 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| C2H4g16220 | 4:29,573,774-29,578,849 | - | - | - | LOC_Os11g39200 | - | - | Detail |
| C2H4g29038 | 4:29,581,039-29,587,691 | + | C1H4g28067 | CX4g033656 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| C2H4g16367 | 4:29,600,435-29,600,761 | - | C1H4g24932 | CX4g035876 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| C2H4g07344 | 4:29,601,664-29,602,626 | - | C1H4g24932 | CX4g035876 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| C2H4g09789 | 4:29,606,790-29,608,858 | - | C1H4g07972 | CX4g035340 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| C2H4g30313 | 4:29,609,779-29,613,238 | - | C1H4g22743 | CX4g036253 | LOC_Os04g57550 | Os04g0671200 | - | Detail |
| C2H4g09887 | 4:29,614,185-29,618,369 | - | C1H4g10516 | CX4g034946 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| C2H4g13506 | 4:29,617,381-29,618,045 | + | - | - | - | Os04g0671500 | - | Detail |
| C2H4g11022 | 4:29,628,724-29,631,618 | - | C1H4g18642 | CX4g034217 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| C2H4g26599 | 4:29,633,592-29,636,964 | - | C1H4g10863 | CX4g034187 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| C2H4g28020 | 4:29,638,905-29,646,220 | - | C1H4g29876 | CX4g036532 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| C2H4g22256 | 4:29,660,825-29,663,863 | - | C1H4g03758 | CX4g032181 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| C2H4g16737 | 4:29,675,662-29,681,595 | - | C1H4g28972 | CX4g031927 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| C2H4g14699 | 4:29,683,065-29,686,340 | - | C1H4g18744 | CX4g031948 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030763 | 3:26,736,584-26,738,809 | - | C1H3g01922 | C2H3g11307 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| CX3g025191 | 3:26,740,729-26,744,598 | - | C1H3g14178 | C2H3g20554 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| CX3g026724 | 3:26,757,762-26,762,541 | + | C1H3g25650 | C2H3g01107 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| CX3g026549 | 3:26,763,991-26,765,926 | - | C1H3g26419 | C2H3g12581 | - | Os03g0709000 | - | Detail |
| CX3g030849 | 3:26,767,891-26,768,371 | - | C1H3g00554 | C2H3g23367 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| CX3g026447 | 3:26,769,961-26,772,840 | + | C1H3g14274 | C2H3g00333 | LOC_Os03g50150 | Os03g0709200 | - | Detail |
| CX3g027687 | 3:26,774,118-26,775,905 | - | C1H3g00862 | C2H3g17990 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| CX3g031286 | 3:26,797,749-26,799,248 | + | C1H3g26800 | C2H3g22762 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| CX3g026541 | 3:26,799,753-26,802,292 | - | C1H3g31046 | C2H3g19621 | LOC_Os03g50220 | - | - | Detail |
| CX3g026477 | 3:26,803,329-26,808,617 | - | C1H3g04126 | C2H3g09223 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| CX3g028078 | 3:26,811,079-26,813,590 | + | C1H3g05875 | C2H3g20376 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| CX3g030479 | 3:26,814,110-26,814,403 | - | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX3g028947 | 3:26,816,006-26,816,269 | - | - | - | LOC_Os03g50260 | Os03g0710550 | - | Detail |
| CX3g029323 | 3:26,817,427-26,818,706 | - | C1H3g17966 | C2H3g06541 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| CX3g027946 | 3:26,821,234-26,823,650 | - | C1H3g12018 | C2H3g00310 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| CX3g029821 | 3:26,831,727-26,833,792 | + | C1H3g30860 | C2H3g13816 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| CX3g027568 | 3:26,835,286-26,835,780 | - | C1H8g13263 | - | LOC_Os11g39380 | - | - | Detail |
| CX3g029660 | 3:26,838,109-26,845,624 | + | C1H3g01378 | C2H3g13830 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| CX3g028553 | 3:26,852,029-26,853,647 | + | C1H3g31233 | C2H3g07676 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| CX3g031158 | 3:26,855,032-26,869,877 | - | C1H3g26509 | C2H3g02097 | LOC_Os03g50320 | Os03g0711200 | - | Detail |