| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g30386 | 3:2,493,645-2,495,339 | - | C1H3g31058 | CX3g030512 | LOC_Os03g05750 | Os03g0152000 | - | Detail |
| C2H3g26526 | 3:2,497,685-2,500,591 | + | C1H3g20082 | CX3g026911 | LOC_Os03g05760 | Os03g0152100 | - | Detail |
| C2H3g15744 | 3:2,506,063-2,507,620 | + | C1H3g31474 | CX3g029839 | LOC_Os03g05770 | Os03g0152300 | - | Detail |
| C2H3g01485 | 3:2,509,760-2,514,659 | - | C1H3g20421 | CX3g028932 | LOC_Os03g05780 | Os03g0152400 | - | Detail |
| C2H3g04206 | 3:2,518,282-2,520,831 | - | C1H3g15708 | CX3g025626 | LOC_Os03g05800 | Os03g0152600 | - | Detail |
| C2H3g16126 | 3:2,522,606-2,527,612 | + | C1H3g24101 | CX3g028763 | LOC_Os03g05806 | Os03g0152700 | TCD3, OsPUS1 | Detail |
| C2H3g23725 | 3:2,528,213-2,533,756 | + | C1H3g07789 | CX3g028004 | LOC_Os03g05812 | - | - | Detail |
| C2H3g05754 | 3:2,536,095-2,544,348 | + | C1H3g06558 | CX3g031112 | LOC_Os03g05820 | Os03g0152900 | - | Detail |
| C2H3g15298 | 3:2,545,196-2,552,983 | - | C1H3g08014 | CX3g030862 | LOC_Os03g05830 | Os03g0153000 | - | Detail |
| C2H3g18916 | 3:2,555,365-2,555,777 | + | C1H3g09831 | - | LOC_Os03g05840 | Os03g0153100 | - | Detail |
| C2H3g20486 | 3:2,556,628-2,558,440 | + | C1H3g11969 | - | LOC_Os03g05880 | Os03g0153100 | - | Detail |
| C2H3g30530 | 3:2,566,329-2,567,536 | + | C1H3g06494 | - | LOC_Os03g05880 | Os03g0153500 | - | Detail |
| C2H3g25228 | 3:2,572,439-2,572,768 | + | C1H3g10654 | - | LOC_Os03g05900 | Os03g0153900 | - | Detail |
| C2H3g13712 | 3:2,573,925-2,574,786 | + | C1H3g10654 | - | LOC_Os03g05900 | Os03g0153900 | - | Detail |
| C2H3g12605 | 3:2,576,170-2,578,023 | + | C1H3g09326 | - | LOC_Os03g05910 | Os03g0154000 | - | Detail |
| C2H3g05179 | 3:2,578,722-2,582,272 | + | C1H3g00046 | - | LOC_Os03g05920 | Os03g0154100 | - | Detail |
| C2H3g05062 | 3:2,582,727-2,583,254 | + | C1H3g08889 | CX11g014366 | LOC_Os03g05930 | Os11g0602400 | - | Detail |
| C2H3g25344 | 3:2,586,628-2,589,846 | + | C1H3g17558 | CX3g029639 | LOC_Os03g05980 | Os03g0154700 | - | Detail |
| C2H3g25471 | 3:2,593,167-2,594,976 | + | C1H3g01440 | - | LOC_Os03g05920 | Os03g0154100 | - | Detail |
| C2H3g13676 | 3:2,604,589-2,605,520 | + | C1H3g23253 | CX3g026862 | LOC_Os03g06000 | Os03g0155300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030763 | 3:26,736,584-26,738,809 | - | C1H3g01922 | C2H3g11307 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| CX3g025191 | 3:26,740,729-26,744,598 | - | C1H3g14178 | C2H3g20554 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| CX3g026724 | 3:26,757,762-26,762,541 | + | C1H3g25650 | C2H3g01107 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| CX3g026549 | 3:26,763,991-26,765,926 | - | C1H3g26419 | C2H3g12581 | - | Os03g0709000 | - | Detail |
| CX3g030849 | 3:26,767,891-26,768,371 | - | C1H3g00554 | C2H3g23367 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| CX3g026447 | 3:26,769,961-26,772,840 | + | C1H3g14274 | C2H3g00333 | LOC_Os03g50150 | Os03g0709200 | - | Detail |
| CX3g027687 | 3:26,774,118-26,775,905 | - | C1H3g00862 | C2H3g17990 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| CX3g031286 | 3:26,797,749-26,799,248 | + | C1H3g26800 | C2H3g22762 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| CX3g026541 | 3:26,799,753-26,802,292 | - | C1H3g31046 | C2H3g19621 | LOC_Os03g50220 | - | - | Detail |
| CX3g026477 | 3:26,803,329-26,808,617 | - | C1H3g04126 | C2H3g09223 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| CX3g028078 | 3:26,811,079-26,813,590 | + | C1H3g05875 | C2H3g20376 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| CX3g030479 | 3:26,814,110-26,814,403 | - | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX3g028947 | 3:26,816,006-26,816,269 | - | - | - | LOC_Os03g50260 | Os03g0710550 | - | Detail |
| CX3g029323 | 3:26,817,427-26,818,706 | - | C1H3g17966 | C2H3g06541 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| CX3g027946 | 3:26,821,234-26,823,650 | - | C1H3g12018 | C2H3g00310 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| CX3g029821 | 3:26,831,727-26,833,792 | + | C1H3g30860 | C2H3g13816 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| CX3g027568 | 3:26,835,286-26,835,780 | - | C1H8g13263 | - | LOC_Os11g39380 | - | - | Detail |
| CX3g029660 | 3:26,838,109-26,845,624 | + | C1H3g01378 | C2H3g13830 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| CX3g028553 | 3:26,852,029-26,853,647 | + | C1H3g31233 | C2H3g07676 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| CX3g031158 | 3:26,855,032-26,869,877 | - | C1H3g26509 | C2H3g02097 | LOC_Os03g50320 | Os03g0711200 | - | Detail |