| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02644 | 5:16,248,352-16,248,764 | + | C2H5g17544 | - | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C1H5g06235 | 5:16,251,846-16,259,936 | - | C2H5g09572 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C1H5g07655 | 5:16,273,502-16,276,522 | + | C2H5g14010 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C1H5g16377 | 5:16,292,543-16,298,303 | - | C2H5g30500 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C1H5g29208 | 5:16,299,479-16,300,013 | - | - | - | - | - | - | Detail |
| C1H5g18086 | 5:16,310,502-16,318,701 | + | C2H5g11444 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C1H5g22231 | 5:16,320,596-16,323,884 | - | C2H5g22366 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C1H5g07753 | 5:16,338,372-16,339,250 | - | C2H5g14510 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C1H5g01736 | 5:16,341,816-16,342,366 | - | C2H5g20401 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C1H5g28806 | 5:16,342,750-16,348,841 | - | C2H5g21665 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C1H5g13458 | 5:16,356,139-16,360,666 | - | C2H5g22578 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C1H5g23907 | 5:16,367,482-16,368,533 | + | C2H5g22810 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C1H5g25708 | 5:16,372,134-16,373,574 | + | C2H5g14027 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| C1H5g10361 | 5:16,373,908-16,378,104 | + | C2H5g06598 | CX5g038053 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| C1H5g20921 | 5:16,379,238-16,384,284 | + | C2H5g24418 | CX5g040809 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| C1H5g09074 | 5:16,388,271-16,390,229 | - | C2H5g11844 | CX5g041144 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| C1H5g30333 | 5:16,414,244-16,415,575 | + | C2H5g23232 | CX5g037035 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| C1H5g08005 | 5:16,425,658-16,426,710 | + | C2H5g30472 | CX5g037287 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| C1H5g00588 | 5:16,435,503-16,440,524 | - | C2H5g17136 | CX5g040712 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| C1H5g18824 | 5:16,453,084-16,455,295 | + | C2H5g01676 | CX5g037111 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030763 | 3:26,736,584-26,738,809 | - | C1H3g01922 | C2H3g11307 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| CX3g025191 | 3:26,740,729-26,744,598 | - | C1H3g14178 | C2H3g20554 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| CX3g026724 | 3:26,757,762-26,762,541 | + | C1H3g25650 | C2H3g01107 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| CX3g026549 | 3:26,763,991-26,765,926 | - | C1H3g26419 | C2H3g12581 | - | Os03g0709000 | - | Detail |
| CX3g030849 | 3:26,767,891-26,768,371 | - | C1H3g00554 | C2H3g23367 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| CX3g026447 | 3:26,769,961-26,772,840 | + | C1H3g14274 | C2H3g00333 | LOC_Os03g50150 | Os03g0709200 | - | Detail |
| CX3g027687 | 3:26,774,118-26,775,905 | - | C1H3g00862 | C2H3g17990 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| CX3g031286 | 3:26,797,749-26,799,248 | + | C1H3g26800 | C2H3g22762 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| CX3g026541 | 3:26,799,753-26,802,292 | - | C1H3g31046 | C2H3g19621 | LOC_Os03g50220 | - | - | Detail |
| CX3g026477 | 3:26,803,329-26,808,617 | - | C1H3g04126 | C2H3g09223 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| CX3g028078 | 3:26,811,079-26,813,590 | + | C1H3g05875 | C2H3g20376 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| CX3g030479 | 3:26,814,110-26,814,403 | - | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX3g028947 | 3:26,816,006-26,816,269 | - | - | - | LOC_Os03g50260 | Os03g0710550 | - | Detail |
| CX3g029323 | 3:26,817,427-26,818,706 | - | C1H3g17966 | C2H3g06541 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| CX3g027946 | 3:26,821,234-26,823,650 | - | C1H3g12018 | C2H3g00310 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| CX3g029821 | 3:26,831,727-26,833,792 | + | C1H3g30860 | C2H3g13816 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| CX3g027568 | 3:26,835,286-26,835,780 | - | C1H8g13263 | - | LOC_Os11g39380 | - | - | Detail |
| CX3g029660 | 3:26,838,109-26,845,624 | + | C1H3g01378 | C2H3g13830 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| CX3g028553 | 3:26,852,029-26,853,647 | + | C1H3g31233 | C2H3g07676 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| CX3g031158 | 3:26,855,032-26,869,877 | - | C1H3g26509 | C2H3g02097 | LOC_Os03g50320 | Os03g0711200 | - | Detail |